Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05819 and BPUM_3452
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence pep-align/BSNT_05819___sacP.1.24716.seq
# -bsequence pep-align/BPUM_3452___sacP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05819___sacP-BPUM_3452___sacP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05819___sacP-BPUM_3452___sacP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05819___sacP
# 2: BPUM_3452___sacP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity: 357/465 (76.8%)
# Similarity: 405/465 (87.1%)
# Gaps: 7/465 ( 1.5%)
# Score: 1850.5
#
#
#=======================================
BSNT_05819___ 1 MDYKETAKRLIELLGGKENIISAAHCATRLRLVMKDESKIDQAQVEELDG 50
|||::|||.|.||||||||:|||.|||||||||||||..||:..:|||:|
BPUM_3452___s 1 MDYQKTAKELTELLGGKENVISATHCATRLRLVMKDEELIDKDAIEELEG 50
BSNT_05819___ 51 VKGAFSSSGQYQIIFGTGLVNKVFDAFAK----EADIEREEHVNHQDAAK 96
||||||||||:|||||||.||||::.||: |.|.|:::.|:|.:|.|
BPUM_3452___s 51 VKGAFSSSGQFQIIFGTGAVNKVYEPFARETGLETDDEKQKPVSHDEAVK 100
BSNT_05819___ 97 EKLNPAARFAKTLSNIFVPIIPAIVASGLLMGLLGMINAFHWMSKDSALL 146
:|:||.||||||||||||||||||||||||||||||:.||.|....||:.
BPUM_3452___s 101 QKMNPLARFAKTLSNIFVPIIPAIVASGLLMGLLGMMKAFKWADPSSAIF 150
BSNT_05819___ 147 QLLDMFSSAAFIFLPILIGVSASKEFGSNPYLGAVIGGIMIHPTLLNPWG 196
|:||||||||||.|||||||||:||||.|||||||||||||||.||||||
BPUM_3452___s 151 QMLDMFSSAAFIILPILIGVSAAKEFGGNPYLGAVIGGIMIHPNLLNPWG 200
BSNT_05819___ 197 LAEATPDYMHLFGFDIALLGYQGTVIPVLLAVYVMSKVEKWTRKVVPHAV 246
|.:|.|:|||||.|||||||||||||||||.||:|..|||..|||||:::
BPUM_3452___s 201 LTDAKPEYMHLFNFDIALLGYQGTVIPVLLTVYIMCLVEKNLRKVVPNSI 250
BSNT_05819___ 247 DLLVTPFVTVIVTGFVAVIAIGPLGRALGSGITVALTYVYDHAGFVAGLI 296
||||||||||||||||..||:|||||.||:||:.|||::||||||:||||
BPUM_3452___s 251 DLLVTPFVTVIVTGFVTFIAVGPLGRMLGTGISNALTFIYDHAGFLAGLI 300
BSNT_05819___ 297 FGGTYSLIVLTGVHHSFHAIEAGLIADIGKNYLLPIWSMANVAQGGAGLA 346
|||.||||||||||||||||||||:.|||:|||||||:|:||||||||||
BPUM_3452___s 301 FGGAYSLIVLTGVHHSFHAIEAGLLNDIGRNYLLPIWAMSNVAQGGAGLA 350
BSNT_05819___ 347 VFFMAKKAKTKEIALPAAFSAFLGITEPVIFGVNLRYRKPFIAAMIGGAL 396
|||:||:|||||||||||||||||||||||||||||||||||||||||||
BPUM_3452___s 351 VFFLAKRAKTKEIALPAAFSAFLGITEPVIFGVNLRYRKPFIAAMIGGAL 400
BSNT_05819___ 397 GGAYVVFTHVAANAYGLTGIPMIAIAAPFGFSNLIHYLIGMAIAAVSAFI 446
|||:||||.|||||||||||||||||||||..|:::|:|||.||...:|.
BPUM_3452___s 401 GGAFVVFTKVAANAYGLTGIPMIAIAAPFGVQNVVNYVIGMLIAVAVSFT 450
BSNT_05819___ 447 AAFVMKINEDEERKK 461
...:.|:.|.|:
BPUM_3452___s 451 LTIMFKVKEVEK--- 462
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