Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05817 and BPUM_3451
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_05817___sacA.1.24716.seq
# -bsequence pep-align/BPUM_3451___sacA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05817___sacA-BPUM_3451___sacA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05817___sacA-BPUM_3451___sacA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05817___sacA
# 2: BPUM_3451___sacA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity: 278/489 (56.9%)
# Similarity: 352/489 (72.0%)
# Gaps: 10/489 ( 2.0%)
# Score: 1574.0
#
#
#=======================================
BSNT_05817___ 1 ----MTAHDQELRRRAYEEVEKKEPIADSDPHRQHFHIMPPVGLLNDPNG 46
||..|..||::..|.:...|.:...|.:|||||:||||||||||||
BPUM_3451___s 1 MVTVMTTTDAALRQKVAERIRNYEHLVKKDVYRQHFHLMPPVGLLNDPNG 50
BSNT_05817___ 47 LIYWKGSYHVFFQWQPFQTGHGAKFWGHYTTQDVVNWKREEIALAPSDWF 96
||.|||.||:|:|||||:||||||||||||:.|:|||:.||.||||||||
BPUM_3451___s 51 LIQWKGVYHIFYQWQPFKTGHGAKFWGHYTSTDLVNWQHEEAALAPSDWF 100
BSNT_05817___ 97 DKNGCYSGSAVTKDDRLYLFYTGNVRDQDGNRETYQCLAVSDDGLSFEKK 146
|:|||||||||..|..:|:.|||||||:.||||||||||||:||:.|:||
BPUM_3451___s 101 DQNGCYSGSAVIDDGHMYVMYTGNVRDEQGNRETYQCLAVSEDGIHFQKK 150
BSNT_05817___ 147 GVVARLPEGYTAHFRDPKVWEHEGTWYMVIGAQTENLKGQAVLFASDNLS 196
||||.||:|:||||||||||:....||||:|||:.:|||..|||.|:.|.
BPUM_3451___s 151 GVVATLPDGFTAHFRDPKVWKRNDQWYMVLGAQSLDLKGNLVLFTSNTLD 200
BSNT_05817___ 197 EWRFLGPITGAGFNGLDDFGYMWECPDLFSLQGSDVLIVSPQGLEADGFR 246
.|.|.|.|.|:|.|||:||||||||||||.|.|.|||||||||||.:|.:
BPUM_3451___s 201 NWTFQGIIAGSGKNGLEDFGYMWECPDLFELDGRDVLIVSPQGLEPNGLK 250
BSNT_05817___ 247 YQNVYQSGYFVGCLDYNKPELKHGEFTELDQGFDFYAPQTLEDNQGRRIL 296
|.|.:|||||||.||.:..:..||.|.|||:||||||.||..|..|||:|
BPUM_3451___s 251 YHNTHQSGYFVGKLDDHTYQYTHGAFEELDRGFDFYAQQTFLDESGRRLL 300
BSNT_05817___ 297 FAWMAVPDQDEGSHPTIDYHWIHCMTLPRQLTISGE-KLIQQPLPELKAM 345
..||.||||.|..||||.|.||||:|:||:|.:..: .|||:|:.||:||
BPUM_3451___s 301 IGWMGVPDQGEEHHPTISYQWIHCLTIPRELRLDEDGHLIQKPVTELQAM 350
BSNT_05817___ 346 RRNEKKIHINMHGSSGTLPVEKPERAEILLEDIHTESGFSISIRGTATFS 395
|.||::...::..|..::||:....||:.::.|.|:.||...||..|...
BPUM_3451___s 351 RTNEQEHVFHIKRSVQSIPVDDITSAELFIDQIDTQKGFECCIRAAARII 400
BSNT_05817___ 396 FQKDEGIVTLERKSFDGKRKESRHCRIKDLHTVHMFLDASSVEIFINNGE 445
:.||||.:||||:.|:.:.||.|...|::||.:|:.:||||:|||:|.|.
BPUM_3451___s 401 YDKDEGKLTLERERFEDRTKEVREVAIEELHDLHILIDASSIEIFVNGGR 450
BSNT_05817___ 446 EVFSARYFPFPGNHEVTASSTGKSEMNVLIWTLM----- 479
||.:|||||.|||..::.|...::::.:..|.|.
BPUM_3451___s 451 EVLTARYFPSPGNKSISISGRNETKLKLKTWHLQRKVDQ 489
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