Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05816 and BPUM_3450

See DNA alignment / Visit BSNT_05816 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence pep-align/BSNT_05816___ywdA.1.24716.seq
#    -bsequence pep-align/BPUM_3450___ywdA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05816___ywdA-BPUM_3450___ywdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05816___ywdA-BPUM_3450___ywdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05816___ywdA
# 2: BPUM_3450___ywdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      39/112 (34.8%)
# Similarity:    55/112 (49.1%)
# Gaps:          30/112 (26.8%)
# Score: 176.0
# 
#
#=======================================

BSNT_05816___      1 ----------------------------MNIHEQKITPECLEKAANQVED     22
                                                 :|..:|..|.:.||..|:.|||
BPUM_3450___y      1 MELWYHFKIYTAEADVYPNAIGQKGVVYLNSKQQPTTRKRLETMADHVED     50

BSNT_05816___     23 KREEYKDVLLQLKKMLG-GTTPHSETAEILTRAYEQMKEYALFVQSIETF     71
                     ||||||::|:|::.:|| .:....|..|.|:..|:|||||||||:|||.|
BPUM_3450___y     51 KREEYKELLIQVQSILGEPSLEQEELKEKLSDTYKQMKEYALFVESIEAF    100

BSNT_05816___     72 LRKSANNLKIK-     82
                     :||.|.....: 
BPUM_3450___y    101 IRKMAKESDQQK    112


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