Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05815 and BPUM_3448

See DNA alignment / Visit BSNT_05815 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence pep-align/BSNT_05815___thiD.1.24716.seq
#    -bsequence pep-align/BPUM_3448___thiD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05815___thiD-BPUM_3448___thiD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05815___thiD-BPUM_3448___thiD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05815___thiD
# 2: BPUM_3448___thiD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     219/271 (80.8%)
# Similarity:   245/271 (90.4%)
# Gaps:           2/271 ( 0.7%)
# Score: 1128.0
# 
#
#=======================================

BSNT_05815___      1 MSMNKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSW     50
                     ||||||||||||||||||||||||||||||||||||||||:|||||:|.|
BPUM_3448___t      1 MSMNKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVVVAMDPHNHW     50

BSNT_05815___     51 DHQVFPIDTDTIRAQLATITDGIGVDAMKTGMLPTVDIIELAAKTIKEKQ    100
                     |||||||||.||||||:||.:||||||:|||||||||:|||||.|||...
BPUM_3448___t     51 DHQVFPIDTATIRAQLSTIVEGIGVDALKTGMLPTVDVIELAADTIKTYD    100

BSNT_05815___    101 LKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG    150
                     ||||||||||||||||||||||||:||||:|.|||||||||||||.||||
BPUM_3448___t    101 LKNVVIDPVMVCKGANEVLYPEHAEALREKLTPLATVITPNLFEAGQLSG    150

BSNT_05815___    151 MDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEV    200
                     :.|:||::.|.||||:||.|||:||||||||||..:||:|:||||:|.|.
BPUM_3448___t    151 IGEIKTIEQMEEAAKRIHELGAKYVVITGGGKLSPDKAIDLLYDGQTFER    200

BSNT_05815___    201 LESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIYAAKEFITAAIKES    250
                     ||::.|||.||||||||||||||||||.|::|||||||||||||||||.|
BPUM_3448___t    201 LETDKIDTEYTHGAGCTFSAAVTAELANGSDVKEAIYAAKEFITAAIKGS    250

BSNT_05815___    251 FPLNQYVGPTKHSALRLNQQS    271
                     |.||:|:|||||||.|.::  
BPUM_3448___t    251 FQLNEYIGPTKHSAHRFDK--    269


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