Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05814 and BPUM_3445

See DNA alignment / Visit BSNT_05814 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence pep-align/BSNT_05814___ywdF.1.24716.seq
#    -bsequence pep-align/BPUM_3445___ywdF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05814___ywdF-BPUM_3445___ywdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05814___ywdF-BPUM_3445___ywdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05814___ywdF
# 2: BPUM_3445___ywdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 275
# Identity:     187/275 (68.0%)
# Similarity:   227/275 (82.5%)
# Gaps:           7/275 ( 2.5%)
# Score: 999.0
# 
#
#=======================================

BSNT_05814___      1 MKISIVIVTYNRIPALCELLESISRQTLKPYEIIIVNDAGESVVPVKALY     50
                     ||||::|||:||:.|||||||||:|||::|:||::||||||.|..::.||
BPUM_3445___y      1 MKISLLIVTHNRLSALCELLESITRQTVQPFEIVVVNDAGERVEVIQELY     50

BSNT_05814___     51 PELPIAVINLEKNSGHVAARNAGVKEASGDCIMLCDDDDFFTPGHIEKMA    100
                     |||||.:|:|::|..||.|||.||:|.:||.|||.||||:|||.|||:|:
BPUM_3445___y     51 PELPIRLIHLDENVQHVNARNVGVRELTGDVIMLSDDDDYFTPCHIERMS    100

BSNT_05814___    101 KEIETADFVHSDAEIVSFEEKYGTRYPVSRKLFAYTADYEDMRVFSTYVP    150
                     |.:|.||||.|||||||||:|..||:||||:||||||..|||||||||||
BPUM_3445___y    101 KALEDADFVFSDAEIVSFEKKGTTRFPVSRRLFAYTAAIEDMRVFSTYVP    150

BSNT_05814___    151 SGSMYRRFLHDEIGYFDADVHNYWDWDFYLRAAKDYRVKRVPCASVIYAF    200
                     |||||:|.:||||||||..:|:||||||:||..:..||||||.|||||||
BPUM_3445___y    151 SGSMYKRCIHDEIGYFDPAMHHYWDWDFFLRVTQHARVKRVPAASVIYAF    200

BSNT_05814___    201 SDAGDNQSADLGAKRKQYLDRLSEKHGLGELPTKNFAVLLEEPEMKRREA    250
                     .|.|.|||:|||..||.|||.||||||||:|||.|||||||||.||:||:
BPUM_3445___y    201 FDGGGNQSSDLGETRKNYLDDLSEKHGLGDLPTANFAVLLEEPAMKKRES    250

BSNT_05814___    251 KSEMVWDGEPVYSRLHRS-------    268
                     :||:||||:|:.|||.:.       
BPUM_3445___y    251 ESEIVWDGKPMISRLAQQTQGGEPQ    275


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