Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05807 and BPUM_3441
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_05807___ywdJ.1.24716.seq
# -bsequence pep-align/BPUM_3441___ywdJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05807___ywdJ-BPUM_3441___ywdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05807___ywdJ-BPUM_3441___ywdJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05807___ywdJ
# 2: BPUM_3441___ywdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 280/440 (63.6%)
# Similarity: 361/440 (82.0%)
# Gaps: 5/440 ( 1.1%)
# Score: 1491.0
#
#
#=======================================
BSNT_05807___ 1 MKLVLGALQWTAFIIAAAIVVPVAVAQSFHLDHSDSARLIQSTFFVLGIA 50
|||.|||:||.||.|||:|.||:|:||:|.|:...||.|||||||.||:.
BPUM_3441___y 1 MKLFLGAIQWMAFFIAASIAVPIAIAQAFELNQVQSAELIQSTFFSLGLV 50
BSNT_05807___ 51 AVIQCLKGHRLPINESPAGLWWGVYTIYAGLTGTVFATYGDTLRGLQGAL 100
|::|||.||.||||||||||||||||:|||:|||:||||.:||:.|||||
BPUM_3441___y 51 AMVQCLCGHMLPINESPAGLWWGVYTLYAGMTGTIFATYPETLQALQGAL 100
BSNT_05807___ 101 LVSAVCFFLLSVFKVIDRLAKLFTPVVTGVYLLLLVMQLSQPIIKGILGI 150
:.||..||:.|:||:|:.||.||||||||:||||||:||||||:||::||
BPUM_3441___y 101 IFSAAFFFIFSLFKIINWLASLFTPVVTGIYLLLLVVQLSQPIMKGLMGI 150
BSNT_05807___ 151 GYRQDGVDGLVFGLALVVIAAAFIMTNSNIMFFKQYSILFALFGGWVLFA 200
|||.:.||||||.|::::|...|:::.|...:.:|:|:||||.|||:|||
BPUM_3441___y 151 GYRGNQVDGLVFCLSILIIVLTFMISRSKWHYLRQFSVLFALAGGWLLFA 200
BSNT_05807___ 201 AAGAAKPIEMPDRLFQLPSLFPFGTPLFNSGLIITSIFITILLIVNMLAS 250
..|.|||:.:|:::.:.|.:||||||:|:|||::||.|||||||||||||
BPUM_3441___y 201 LLGLAKPVRIPEKIIEFPKIFPFGTPVFDSGLLVTSFFITILLIVNMLAS 250
BSNT_05807___ 251 MKVVDIAVKKFSKQPDGKHHERHAGFAASFSHLLSGLTGAIAPVPISGAA 300
:::|:.:||.|.:..:.| ..|.|||.|:|.||||||.||||||||||||
BPUM_3441___y 251 IRIVESSVKAFGELRERK-RARPAGFVAAFGHLLSGLIGAIAPVPISGAA 299
BSNT_05807___ 301 GFIETTKMPSKKPFMLGSILVIVISVIPFFMNTFASLPSPVGFAVNFVVF 350
|||:|||:||:|||.:||:|:::||:.|..|:.|::||||||.|||||||
BPUM_3441___y 300 GFIQTTKIPSRKPFFIGSLLIVLISLFPLLMSFFSALPSPVGLAVNFVVF 349
BSNT_05807___ 351 SAMGGLAFAEFDSYEKEESKRVRSIIGISLLTGVGIMFVPETALKGLHPV 400
|:|.|:|.:|||.|||||..|:|.::||::|.|||.||||:.||||:|||
BPUM_3441___y 350 SSMIGIAMSEFDQYEKEEIPRIRFVLGIAVLAGVGAMFVPQGALKGMHPV 399
BSNT_05807___ 401 FISLLSNGLVLGTLAAIAADQFQLWRRRKSDNLVSTENKH 440
.|||||||||||||.|||.||..|.:::||||||||
BPUM_3441___y 400 LISLLSNGLVLGTLIAIAVDQVLLRKKKKSDNLVST---- 435
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