Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05804 and BPUM_3438
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_05804___ywdL.1.24716.seq
# -bsequence pep-align/BPUM_3438___gerQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05804___ywdL-BPUM_3438___gerQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05804___ywdL-BPUM_3438___gerQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05804___ywdL
# 2: BPUM_3438___gerQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 116/192 (60.4%)
# Similarity: 127/192 (66.1%)
# Gaps: 23/192 (12.0%)
# Score: 542.0
#
#
#=======================================
BSNT_05804___ 1 MKPKKNQYQQMQAFDNMQGYQPQFGANPYPQQGQGSQMQP---------- 40
|| .|||:.|...|:.....|.|:||||||.|..|..:.|
BPUM_3438___g 1 MK-LKNQFGQGSGFEGQDFRQQQYGANPYPAQQMGYSVPPQTQGQMQGQM 49
BSNT_05804___ 41 -MGMQPMMPMQQGQQGQQGQQGFGFPGQQQGGGFQIPSGPTPSGPGQSVP 89
.|..| ||.....||.||.|..|.| :||||||... |:|.
BPUM_3438___g 50 QQGFSP-MPSTGSSQGGQGMQSSGQP-------YQIPSGPIYQ---QNVT 88
BSNT_05804___ 90 GMLPVEESYIENILRLNRGKTATIYMTFENSKEWGSKIFRGVIEAAGRDH 139
|.||:|:|||||||||||||.||||||||.||||.|||||||||||||||
BPUM_3438___g 89 GQLPIEQSYIENILRLNRGKVATIYMTFEASKEWNSKIFRGVIEAAGRDH 138
BSNT_05804___ 140 IIISDPKSGTRYLLLTIYLDYITFDEEIAYTYPYSMASYSPR 181
|||||.|:|||||||||||||||||.||.|.|||||::||||
BPUM_3438___g 139 IIISDNKTGTRYLLLTIYLDYITFDGEIQYDYPYSMSTYSPR 180
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