Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05798 and BPUM_3434
See
DNA alignment /
Visit
BSNT_05798 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence pep-align/BSNT_05798___spsC.1.24716.seq
# -bsequence pep-align/BPUM_3434___spsC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05798___spsC-BPUM_3434___spsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05798___spsC-BPUM_3434___spsC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05798___spsC
# 2: BPUM_3434___spsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 276/392 (70.4%)
# Similarity: 317/392 (80.9%)
# Gaps: 3/392 ( 0.8%)
# Score: 1449.0
#
#
#=======================================
BSNT_05798___ 1 MVQKRNHFLPYSLPLIGKEEIQEVTETLESGWLSKGPKVQQFEKEFAAFV 50
|.:||..||||:||||.:|||:||..||:|||||.||||:|||:||....
BPUM_3434___s 1 MEKKREQFLPYALPLIEQEEIEEVIGTLKSGWLSTGPKVRQFEEEFRKLT 50
BSNT_05798___ 51 GAKHAVAVNSCTAALFLALKAKGIGPGDEVITSPLTFSSTANTIIHTGAT 100
|||||:|||||||||||||||:|||.||||||:||||.:||||||||||.
BPUM_3434___s 51 GAKHAIAVNSCTAALFLALKARGIGNGDEVITTPLTFCATANTIIHTGAA 100
BSNT_05798___ 101 PVFADIDQNTLNIDPVKLEAAVTPRTKAVVPVHFGGQSCDMDAILAIAQN 150
|||.|||..|||:|..|||.|:||.|||:|||||.|||||||.||.||:.
BPUM_3434___s 101 PVFVDIDPATLNLDAEKLEEAITPHTKAIVPVHFAGQSCDMDRILEIAKK 150
BSNT_05798___ 151 HGLFVLEDAAHAVYTTYKQRMIGSIGDATAFSFYATKNLATGEGGMLTTD 200
:.||||||||||::|||..:.||:||||||||||||||:||||||||||:
BPUM_3434___s 151 YDLFVLEDAAHALHTTYHGQPIGAIGDATAFSFYATKNIATGEGGMLTTN 200
BSNT_05798___ 201 DEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYKMNMFDLQAAL 250
|..|||:||.|:||||||.|||||...|:||||||.|||||||||:||:|
BPUM_3434___s 201 DGALADRIRKLALHGMSKGAWNRYGEKGTWYYEVEEPGYKMNMFDVQASL 250
BSNT_05798___ 251 GLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDDGRHAWHLYVL 300
||.||.||||||.|||.||..|..|||:..|||.|.||.:||||||||||
BPUM_3434___s 251 GLVQLNRLDDMQARRELIAKAYNQAFQKETGLILPPVHQEGRHAWHLYVL 300
BSNT_05798___ 301 QVDEKKAGVTRSEMITALKDKYNIGTSVHFIPVHIHPYYQKQFGYKEADF 350
|||.|:|.:||.|:|..|:..|.|||||||||||:|||||:.:.|...||
BPUM_3434___s 301 QVDPKEAFITRDELIDRLQKDYKIGTSVHFIPVHLHPYYQQTYHYSPEDF 350
BSNT_05798___ 351 PNAMNYYKRTLSLPLYPSMSDDDVDDVIEAVRDIVKGAD--- 389
|.::.||||||||||||||:|:||.|||.||..|:|...
BPUM_3434___s 351 PESLAYYKRTLSLPLYPSMTDEDVQDVIAAVVSILKEQKASL 392
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.