Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05796 and BPUM_3433

See DNA alignment / Visit BSNT_05796 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_05796___spsD.1.24716.seq
#    -bsequence pep-align/BPUM_3433___spsD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05796___spsD-BPUM_3433___spsD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05796___spsD-BPUM_3433___spsD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05796___spsD
# 2: BPUM_3433___spsD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     103/294 (35.0%)
# Similarity:   166/294 (56.5%)
# Gaps:           8/294 ( 2.7%)
# Score: 511.0
# 
#
#=======================================

BSNT_05796___      1 ---MYTVKENVSKELIEEFLQSRQLTLDVPYQFSLGLFENSRLQGVLLYE     47
                        ::.:.:.|....:|::.|..:...... ||  ||...::|:.||||:
BPUM_3433___s      1 MKVVHAIDDQVLSVWLEKYGQQIEQMKGFK-QF--GLVSGAQLKAVLLYD     47

BSNT_05796___     48 DSLWESKVLQKKVMNVKLLAANSTGQLKRLFEAFYTVRQMDETDFIFVRV     97
                     .|.|||.:..:.:.:||..||.|....:.|.|.|....:.::.||.|:|:
BPUM_3433___s     48 WSKWESGIFDQHIFHVKFAAAESASAFQELMERFINWMRSEKCDFFFLRL     97

BSNT_05796___     98 PAEDIGAAHVIQQQPSSYFVGSLLKLAMPPSFYD--KTPPFFELGPPEPG    145
                     .|.|:....:.|:....|:||.|.:|..||...:  .|.....:..|:..
BPUM_3433___s     98 EAADVEKNRIAQRLSHVYYVGGLTRLEAPPVHMEMPSTSEDVVISLPDEK    147

BSNT_05796___    146 DTEAICELARDSFTKSRYFQDPHLSRDAANKIFQEWTRNNLNGRAAVNIV    195
                     :.:....||..:|.||||..||.|.::|....||||.:|||.|||.:|:.
BPUM_3433___s    148 EYDEAVSLAYQAFVKSRYALDPFLDQNAVQHFFQEWMKNNLLGRADINLA    197

BSNT_05796___    196 AKHNGEVIGYLQGLSRDDECILDLMAVKPGFEGKRIAFHLLANLIEQPET    245
                     ||.|.|::|.:|||.:|||.:|||:|::|..:||.:...|:..:::....
BPUM_3433___s    198 AKVNDEIVGLIQGLIKDDELVLDLLAIRPDAQGKGLGKKLVMAMVKASYE    247

BSNT_05796___    246 QKHRTVTAGTQLHNVRAIRLYERMGFTAEQSYYYYHIWPGKEAK    289
                     :.||.::||||:||..||:|||::||..:.|:.|||:||.|..:
BPUM_3433___s    248 RGHRFMSAGTQMHNTTAIQLYEKLGFRTKNSFLYYHVWPKKGER    291


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