Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05793 and BPUM_3431

See DNA alignment / Visit BSNT_05793 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_05793___spsF.1.24716.seq
#    -bsequence pep-align/BPUM_3431___spsF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05793___spsF-BPUM_3431___spsF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05793___spsF-BPUM_3431___spsF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05793___spsF
# 2: BPUM_3431___spsF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     113/247 (45.7%)
# Similarity:   162/247 (65.6%)
# Gaps:           8/247 ( 3.2%)
# Score: 590.5
# 
#
#=======================================

BSNT_05793___      1 -MNDILFIIQARMGSTRLPGKVLRPLGSNRLLDILVHRVRQSAFYQKDRD     49
                      :||:||:|||||||||||.||::|:|...|:|.:|.||:||..|.....
BPUM_3431___s      1 MINDVLFVIQARMGSTRLPKKVMKPIGGMALIDFIVERVKQSDHYNHKTQ     50

BSNT_05793___     50 NLVIATSDKETDDILEAHCIKQGFRVFRGSEERVLDRFVKVIEAVKPSVI     99
                     ||:|||:.:..||:|..:|:.:|::||||||..||.||.|:.:..:|.:|
BPUM_3431___s     51 NLMIATTVEAEDDLLAHYCLSKGYKVFRGSEMDVLQRFAKIAQHFEPQII    100

BSNT_05793___    100 IRLTGDNPFVDPELLDVMIKAHFDQGSDYTYILNAPLGICGEVVNANLLI    149
                     :||||||||:|||||..|::.|..:.:||||....||||.||::||.:|.
BPUM_3431___s    101 VRLTGDNPFIDPELLSKMLEEHKQKKADYTYTTGTPLGISGEMINATILR    150

BSNT_05793___    150 DISRIQNMEDQYQEHVTLYIRNHPALYRVQFLEAPERFRAPQYRLTIDTK    199
                     :|......:.: :||||||||.||..:::|....|:....|.||.||||:
BPUM_3431___s    151 EIDNFPLTQPE-REHVTLYIRKHPEQFQLQLFTPPKELAYPAYRFTIDTE    199

BSNT_05793___    200 EDYESIKALYQKAGERPDVSASELITLLNRNPDA------ATEREAD    240
                     |||.....|.:|||....|..:||||:..::||.      ..:::|:
BPUM_3431___s    200 EDYVFATRLLEKAGGSNAVPTAELITICEQDPDMVRLNQFVKQKDAE    246


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