Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05793 and BPUM_3431
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence pep-align/BSNT_05793___spsF.1.24716.seq
# -bsequence pep-align/BPUM_3431___spsF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05793___spsF-BPUM_3431___spsF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05793___spsF-BPUM_3431___spsF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05793___spsF
# 2: BPUM_3431___spsF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity: 113/247 (45.7%)
# Similarity: 162/247 (65.6%)
# Gaps: 8/247 ( 3.2%)
# Score: 590.5
#
#
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BSNT_05793___ 1 -MNDILFIIQARMGSTRLPGKVLRPLGSNRLLDILVHRVRQSAFYQKDRD 49
:||:||:|||||||||||.||::|:|...|:|.:|.||:||..|.....
BPUM_3431___s 1 MINDVLFVIQARMGSTRLPKKVMKPIGGMALIDFIVERVKQSDHYNHKTQ 50
BSNT_05793___ 50 NLVIATSDKETDDILEAHCIKQGFRVFRGSEERVLDRFVKVIEAVKPSVI 99
||:|||:.:..||:|..:|:.:|::||||||..||.||.|:.:..:|.:|
BPUM_3431___s 51 NLMIATTVEAEDDLLAHYCLSKGYKVFRGSEMDVLQRFAKIAQHFEPQII 100
BSNT_05793___ 100 IRLTGDNPFVDPELLDVMIKAHFDQGSDYTYILNAPLGICGEVVNANLLI 149
:||||||||:|||||..|::.|..:.:||||....||||.||::||.:|.
BPUM_3431___s 101 VRLTGDNPFIDPELLSKMLEEHKQKKADYTYTTGTPLGISGEMINATILR 150
BSNT_05793___ 150 DISRIQNMEDQYQEHVTLYIRNHPALYRVQFLEAPERFRAPQYRLTIDTK 199
:|......:.: :||||||||.||..:::|....|:....|.||.||||:
BPUM_3431___s 151 EIDNFPLTQPE-REHVTLYIRKHPEQFQLQLFTPPKELAYPAYRFTIDTE 199
BSNT_05793___ 200 EDYESIKALYQKAGERPDVSASELITLLNRNPDA------ATEREAD 240
|||.....|.:|||....|..:||||:..::||. ..:::|:
BPUM_3431___s 200 EDYVFATRLLEKAGGSNAVPTAELITICEQDPDMVRLNQFVKQKDAE 246
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