Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05792 and BPUM_3430

See DNA alignment / Visit BSNT_05792 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_05792___spsG.1.24716.seq
#    -bsequence pep-align/BPUM_3430___spsG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05792___spsG-BPUM_3430___spsG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05792___spsG-BPUM_3430___spsG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05792___spsG
# 2: BPUM_3430___spsG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 350
# Identity:     134/350 (38.3%)
# Similarity:   205/350 (58.6%)
# Gaps:          19/350 ( 5.4%)
# Score: 580.0
# 
#
#=======================================

BSNT_05792___      1 --MRVGIFADGGYEKGMGHVVRMKRLAEGLKQRCL-ITFYTNQE-SEAFL     46
                       .::.|...||:.:||||||||||||:.|.|... :.||||:: ....|
BPUM_3430___s      1 MNKKIMIVVYGGFLRGMGHVVRMKRLAKELIQEGNDLYFYTNEQVCVEML     50

BSNT_05792___     47 HEEHWRVIVKPELQQHEFILREIKSKKLDLLLFDILGAPAELLKKIK-TE     95
                     ....|.|.:..|......|.::||....||||.|:|....:||:.|| :.
BPUM_3430___s     51 SHSAWHVHLVKESNVILQIEQDIKEINPDLLLIDVLHCELQLLRSIKASS    100

BSNT_05792___     96 TDAKIVLFEEKNGKSIQYSDAVINGIYGDIRSRVYVQGNTRIYEGPDYLI    145
                     ::||:|||||:..::.|.:|||:|||||.:..:......|..:.|..||:
BPUM_3430___s    101 SNAKLVLFEEERTEACQLADAVVNGIYGGLDEKHLQVNGTDYFYGTPYLL    150

BSNT_05792___    146 LHPAFQAAREDYTLKKDCRNILVALGGSDPKQLIFKVLAAADQVPDIKDK    195
                     |.......::.|.::|:|:.::::||||||:.|:.|.::|..:...:   
BPUM_3430___s    151 LDHEISKLKDTYEVRKECKKVVISLGGSDPEGLLTKAVSALREAGHL---    197

BSNT_05792___    196 NMMFVMGSASPHQEAVRRRIEKKPQYKMIEQTNDMAGLMKQADAAIVAGG    245
                     :::.|.|.||..:|.:     |....:.|..|:.::..:.:||.||||||
BPUM_3430___s    198 HILAVTGKASRIEEKI-----KATHIQFIRHTDQLSAHLAEADLAIVAGG    242

BSNT_05792___    246 ISLYEAICIGVPCLVLSQVEHQTATAKTFAGQGAALDLGLGELVPDETLI    295
                     ::||||:|||||.:|||||:||..||..||.:||...||||.||.::.:.
BPUM_3430___s    243 MTLYEAVCIGVPSIVLSQVDHQAVTATRFAQKGACYHLGLGRLVDEKDIW    292

BSNT_05792___    296 YQMSRIMSSYPLRLSLHKGGRPLVDGKGIIRVTAI---LQDLYEQEI---    339
                     ..:.|:..||.||.|:|..||.|:||||..||..|   |.:.:::|.   
BPUM_3430___s    293 RAVRRLSGSYFLRRSIHLNGRSLIDGKGTERVKNILIYLMNHHQKEHKDV    342


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