Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05792 and BPUM_3430
See
Amino acid alignment /
Visit
BSNT_05792 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence dna-align/BSNT_05792___spsG.1.24716.seq
# -bsequence dna-align/BPUM_3430___spsG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05792___spsG-BPUM_3430___spsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05792___spsG-BPUM_3430___spsG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05792___spsG
# 2: BPUM_3430___spsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1221
# Identity: 618/1221 (50.6%)
# Similarity: 618/1221 (50.6%)
# Gaps: 393/1221 (32.2%)
# Score: 1306.0
#
#
#=======================================
BSNT_05792___ 1 ---------------ATGCGTGTTGGGATCTTCGCAGACGGCGGCTATGA 35
|||..|||||.| .||||.||.|.|..
BPUM_3430___s 1 ATGAACAAAAAAATCATGATTGTTGTG---------TACGGTGGTTTTTT 41
BSNT_05792___ 36 AAAGGGAATGGGCCATGTTGTCCGGATGAAGAGACTTGCGGAGG----GG 81
||..||||||||.|||||.||..|.|||||..|.||.||..||| |.
BPUM_3430___s 42 AAGAGGAATGGGGCATGTCGTTAGAATGAAACGGCTGGCAAAGGAACTGA 91
BSNT_05792___ 82 CTCAAACAG----CGATGCTTG-ATTACGTTTTATACGAAT---CAGGAG 123
.||||..|| ||| |||| || ||.|||||.||| ||||..
BPUM_3430___s 92 TTCAAGAAGGAAACGA--CTTGTAT----TTCTATACAAATGAACAGGTT 135
BSNT_05792___ 124 TCTGAAGCGTTTCT-TCATGAAGAGCATT-GGCGTGTCA--------TCG 163
|.||.||...|.|| || ||||| .|||||.|| |.|
BPUM_3430___s 136 TGTGTAGAAATGCTCTC-------GCATTCAGCGTGGCATGTTCATTTGG 178
BSNT_05792___ 164 TAAAGCCGGAGCTGCAGCAGCACGAATTTATTC--TC--------CGGGA 203
|.||| |.|.|| |||.||.|| || |.|||
BPUM_3430___s 179 TGAAG-----------GAATCA--AATGTAATCCTTCAGATAGAGCAGGA 215
BSNT_05792___ 204 AATAAAA-AGCAAGAAGCTTGATTTGCTTTTGTTTGAT-------ATTCT 245
.|||||| || |..||.|.||||.|.||.|||.|.||| |||.|
BPUM_3430___s 216 CATAAAAGAG-ATAAATCCTGATCTTCTGTTGATCGATGTCCTTCATTGT 264
BSNT_05792___ 246 AGGC----GCGCCTGCAGAGCTGTTAAAGAAAATAAAGACGGAGA----- 286
...| ||.|||.| ||.|..|.|||| .|
BPUM_3430___s 265 GAACTTCAGCTCCTTC-GATCGATCAAAG--------------CATCCTC 299
BSNT_05792___ 287 CAG--ATGCGAAAATTGTTCTT-TTTGAAGAG--AAAAACGGTAAATCAA 331
||| |||| |||||||.|||| ||||||||| ||.|||.| ||.|
BPUM_3430___s 300 CAGCAATGC-AAAATTGGTCTTATTTGAAGAGGAAAGAACAG--AAGC-- 344
BSNT_05792___ 332 TT--CAATATAGTGACGCAGTCATTAACGGAATTTACGGT-GAC---ATC 375
|| ||...|..|||.||.||..|.|||||.|||||.||| ||| ||.
BPUM_3430___s 345 TTGCCAGCTTGCTGATGCTGTTGTAAACGGCATTTATGGTGGACTGGATG 394
BSNT_05792___ 376 AGAAGCAGGGTGTACGTTCAGGGAAA-CACACG-----CATTTATGAAGG 419
|.|||| ||.|.||.|.||| ..|||| |.||||||
BPUM_3430___s 395 AAAAGC-------ACCTGCAAGTAAATGGCACGGACTACTTTTATG---- 433
BSNT_05792___ 420 TCCGGAC----TATCTTATTCT----TCAC------------------CC 443
|.|| ||| |||||.| |||| ..
BPUM_3430___s 434 ---GAACACCTTAT-TTATTGTTAGATCACGAGATCAGCAAATTAAAAGA 479
BSNT_05792___ 444 CGCCTTTCAGG-CCGCAAGAGAGGATTACACACTTAAGAAAG-ACTGCCG 491
|.|.|.|.||| .||||| ||| |..|||||||| |.||
BPUM_3430___s 480 CACATATGAGGTTCGCAA-AGA---------ATGTAAGAAAGTAGTG--- 516
BSNT_05792___ 492 CAAT-ATCCTTGTTGCATTAGGAGGAAGTGATCC-GAAGCAGCTTATTTT 539
|| |.|||| |||||.|||||||| |||| |.|||||..
BPUM_3430___s 517 --ATCAGCCTT---------GGAGGCAGTGATCCTGAAG--GGTTATTAA 553
BSNT_05792___ 540 TAAAGTGCTGGCTGCCGCTG-ATCA--AGTCCCCGA-------CATAAAA 579
.|||| |||| |||| |.|.|.||| |||
BPUM_3430___s 554 CAAAG-----------GCTGTATCAGCACTTCGCGAAGCCGGCCAT---- 588
BSNT_05792___ 580 GACAAAAACATGATGTTTGTAATGGGGAGCGCTTCACCGCATCAAGAGGC 629
..|.||||..| ||||.|| |.|||.
BPUM_3430___s 589 ---TTACACATTCT-------------AGCGGTT----------ACAGGA 612
BSNT_05792___ 630 AGTCCGAAG----GCGGATCGAAAAGAA-------GCCGCAGTACA-AGA 667
| ||| .||.||||||.|.|| || |||| |.|
BPUM_3430___s 613 A-----AAGCCTCTCGCATCGAAGAAAAAATCAAGGC-----TACACATA 652
BSNT_05792___ 668 TGATCGA------------ACAGACAAATGATATGGCAGGTTTGATGAAA 705
| ||.| ||.||..|||.||.||.|....|||..|
BPUM_3430___s 653 T--TCAATTCATTCGCCATACGGATCAATTATCTGCCCATCTTGCCG--- 697
BSNT_05792___ 706 CAAGCGGACGCAGCCATTGTCGCCGGCGGCATCTCTCTATATGAAGCCAT 755
||||.||...|||.|||||.||.||.||.||..|..|||||||.|||.|
BPUM_3430___s 698 -AAGCCGATCTAGCGATTGTTGCTGGTGGGATGACGTTATATGAGGCCGT 746
BSNT_05792___ 756 TTGCATCGGCGTGCCGTGCCTTGTTCTTTCTCAGGTTGAGCATCAAACGG 805
|||.|||||.|||||..||.||||.|||||.||.||.||.||.|||.|.|
BPUM_3430___s 747 TTGTATCGGGGTGCCTAGCATTGTCCTTTCACAAGTAGACCACCAAGCAG 796
BSNT_05792___ 806 CAACAGCAAAAACA-----TTTGCTGGCCAA---GGCGCC-GCTCTTGAT 846
.|||||| || ||||| .||| ||.||| ||| .|.||
BPUM_3430___s 797 TAACAGC-----CACTCGTTTTGC---ACAAAAGGGAGCCTGCT-ATCAT 837
BSNT_05792___ 847 CTTGGTTTGGGTGAGCTTGTACCGGATGAAACACTCATCTATCAG----- 891
|||||.||.|||...||||| |||||||| ||
BPUM_3430___s 838 CTTGGGTTAGGTCGCCTTGT---GGATGAAA------------AGGATAT 872
BSNT_05792___ 892 ATGTCACGCATTATGA----------GCAGCTATCCTC------------ 919
|||.|..||..|..|| |.||||||..||
BPUM_3430___s 873 ATGGCGTGCTGTTCGAAGGCTGTCCGGTAGCTATTTTCTCCGTAGGAGCA 922
BSNT_05792___ 920 TTCGCCTTTCTTTGCACAAGGGAGGAAGGCCGCTCGTGGATGGCAAAGGC 969
|||.||||..| |||.||.|.|||.|.|||||.|||||.
BPUM_3430___s 923 TTCACCTTAAT------------GGACGGTCACTCATTGATGGAAAAGGA 960
BSNT_05792___ 970 ATTATACGGGT-AACAGCTATTCT--------TCAAGATTTAT-ATGAAC 1009
|....|||.|| ||.|.| ||||| |||.||.|.|| |..||.
BPUM_3430___s 961 ACCGAACGAGTGAAAAAC-ATTCTTATATACCTCATGAATCATCACCAAA 1009
BSNT_05792___ 1010 AAGAGATATAA---------- 1020
|||| |.||||
BPUM_3430___s 1010 AAGA-ACATAAGGATGTGTAG 1029
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.