Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05789 and BPUM_3427

See DNA alignment / Visit BSNT_05789 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:21
# Commandline: needle
#    -asequence pep-align/BSNT_05789___spsK.1.24716.seq
#    -bsequence pep-align/BPUM_3427___spsK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05789___spsK-BPUM_3427___spsK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05789___spsK-BPUM_3427___spsK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05789___spsK
# 2: BPUM_3427___spsK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     178/285 (62.5%)
# Similarity:   221/285 (77.5%)
# Gaps:           3/285 ( 1.1%)
# Score: 948.0
# 
#
#=======================================

BSNT_05789___      1 MTKVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGH     50
                      .|||:||||||||.||.||||:....|||||:.|:|||||::|||:..|
BPUM_3427___s      1 -MKVLITGAGGQLGKELSRQLKEKDITVIALTRSMLNIADQQAVRHAMRH     49

BSNT_05789___     51 YQPDIVVNSAAFTSVDQCEKELDKAYLVNGIGAYYTALESTRIGAQYVHI    100
                     ::|.|||::||:|||||||.|.:||||||||||||||||:..|||..:|:
BPUM_3427___s     50 FRPHIVVSAAAYTSVDQCETETEKAYLVNGIGAYYTALEAKNIGADVLHV     99

BSNT_05789___    101 STDYVFNGKGTQPYREDDPLDPKTIYGKSKRLGEELIRLTTKDSTIIRTS    150
                     ||||||:|:...||:.|...||:|||||||:||||||.|.:.:..|||||
BPUM_3427___s    100 STDYVFDGQADTPYKVDAQADPQTIYGKSKKLGEELIHLVSDEVKIIRTS    149

BSNT_05789___    151 WVYGHGGSNFVETMLKFAETKQELRVVSDQIGSPTYTKDLAEAVIKLFSH    200
                     |:|||.|.|||.|:|:.||||.:||:|:|||||||||||:|||:|.||..
BPUM_3427___s    150 WLYGHEGHNFVNTILRLAETKDQLRIVNDQIGSPTYTKDVAEAIIHLFDQ    199

BSNT_05789___    201 PPGIYHVSNSGICSWYEFAMAIMEESGLETAILPVTTEEYGNKTPRPAYS    250
                     ..|||||||...|||::||..|:.:|||.|.|.|::|||||.:|||||||
BPUM_3427___s    200 QAGIYHVSNRESCSWFDFASEIVAKSGLSTTIEPISTEEYGFQTPRPAYS    249

BSNT_05789___    251 VLSHRAIEEAGIRPRHWREALREYLQERSSTCD--    283
                     ||..:|||..|.:||||::||.||||:......  
BPUM_3427___s    250 VLDLQAIEATGWQPRHWKDALHEYLQKEGRWHQHD    284


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