Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05767 and BPUM_3425

See DNA alignment / Visit BSNT_05767 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:20
# Commandline: needle
#    -asequence pep-align/BSNT_05767___ywfH.1.24716.seq
#    -bsequence pep-align/BPUM_3425___ywfH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05767___ywfH-BPUM_3425___ywfH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05767___ywfH-BPUM_3425___ywfH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05767___ywfH
# 2: BPUM_3425___ywfH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     170/281 (60.5%)
# Similarity:   205/281 (73.0%)
# Gaps:          25/281 ( 8.9%)
# Score: 843.5
# 
#
#=======================================

BSNT_05767___      1 -----------------MSKRTAFVMGASQGIGKAIALKLADQ-HFSLVI     32
                                      :|||.|||.|||.|||||||:|||.| |..::|
BPUM_3425___y      1 MSFYVFYKLSRKGMWISLSKRIAFVTGASTGIGKAIAIKLAAQDHTKVII     50

BSNT_05767___     33 NSRNLDNIESVKEDI----FAKHPEASVIVLAGDMSDRHTRAGIFQEIES     78
                     ||||..::|..::.|    ..|.|   |.:..||||....||..|..|:.
BPUM_3425___y     51 NSRNQPSLEDTRQHIERMAETKEP---VSLFCGDMSHEGMRAEAFAAIDK     97

BSNT_05767___     79 QCGRLDVLINNIPGGAPDTFDNCNIDDMTATFTQKTVAYIDAIKRASSLM    128
                     :.|||||||||||||.|||||:|..:.|.|.|:||.:||||.:|||:.:|
BPUM_3425___y     98 EFGRLDVLINNIPGGKPDTFDSCESEQMLAVFSQKALAYIDMMKRAAVMM    147

BSNT_05767___    129 KQNEFGRIINIVGNLWKEPGANMFTNSMMNAALINASKNISIQLAPHNIT    178
                     |::|:||||.||||||||||..||||||||||:||||||.:.||||..||
BPUM_3425___y    148 KRHEYGRIIQIVGNLWKEPGHQMFTNSMMNAAIINASKNAASQLAPSGIT    197

BSNT_05767___    179 VNCLNPGFIATDRYHQFVENVMKKNSISKQKAEEQVASGIPMKRVGSAEE    228
                     ||||||||||||||.||:||:|:..|:|:::|.:.|||||||:|||||.|
BPUM_3425___y    198 VNCLNPGFIATDRYEQFIENMMRAQSLSREEAVQAVASGIPMQRVGSASE    247

BSNT_05767___    229 TAALAAFLASEEASYITGQQISADGGSMKSI    259
                     .|:||||:|||||||:||||||.||||||||
BPUM_3425___y    248 MASLAAFIASEEASYVTGQQISVDGGSMKSI    278


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