Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05771 and BPUM_3423
See
DNA alignment /
Visit
BSNT_05771 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence pep-align/BSNT_05771___ywfE.1.24716.seq
# -bsequence pep-align/BPUM_3423___bacD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05771___ywfE-BPUM_3423___bacD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05771___ywfE-BPUM_3423___bacD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05771___ywfE
# 2: BPUM_3423___bacD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity: 323/473 (68.3%)
# Similarity: 380/473 (80.3%)
# Gaps: 1/473 ( 0.2%)
# Score: 1683.0
#
#
#=======================================
BSNT_05771___ 1 MERKTVLVIADLGGCPPHMFYKSAAEKYNLVSFIPRPFAITASHAALIEK 50
|.:||||||||||||||||||:|.|..|::||:||||||||..||.||||
BPUM_3423___b 1 MSKKTVLVIADLGGCPPHMFYESVAASYHIVSYIPRPFAITKGHAELIEK 50
BSNT_05771___ 51 YSVAVIKDKDYFKSLADFEHPDSIYWAHEDHNKPEEEVVEQIVKVAEMFG 100
||:|||||:|||.:...|||||||||||:|:.|.|||||:.:|:||..|.
BPUM_3423___b 51 YSIAVIKDRDYFDTNPSFEHPDSIYWAHDDYLKSEEEVVDDLVRVASFFK 100
BSNT_05771___ 101 ADAITTNNELFIAPMAKACERLGLRGAGVQAAENARDKNKMRDAFNKAGV 150
||||||||||||||||||.||||||||||:|||.||||::||.|||:|||
BPUM_3423___b 101 ADAITTNNELFIAPMAKAAERLGLRGAGVKAAELARDKSQMRAAFNEAGV 150
BSNT_05771___ 151 KSIKNKRVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDE 200
|::|.|.||||.||:.|:|.||||||||||||||||||||..|...::..
BPUM_3423___b 151 KAVKTKPVTTLADFQQAIEHIGTPLILKPTYLASSIGVTLFHDRAGSDGL 200
BSNT_05771___ 201 FNRVNDYLKSINVPKAVTFEAPFIAEEFLQGEYGDWYQTEGYSDYISIEG 250
|.||..||::|.||.|||:||.|:||.:|:|.|.||||.:|||||:|:||
BPUM_3423___b 201 FLRVQSYLQTIPVPNAVTYEARFVAETYLEGSYEDWYQDDGYSDYVSVEG 250
BSNT_05771___ 251 IMADGEYFPIAIHDKTPQIGFTETSHITPSILDEEAKKKIVEAAKKANEG 300
::.:|||.|..|||||||:|||||:||||||||.||:..|:|||||||||
BPUM_3423___b 251 LVVEGEYIPFVIHDKTPQVGFTETAHITPSILDNEAQHLIIEAAKKANEG 300
BSNT_05771___ 301 LGLQNCATHTEIKLMKNREPGLIESAARFAGWNMIPNIKKVFGLDMAQLL 350
|||:||||||||||||||:.|||||||||||||||||||||||:|||:||
BPUM_3423___b 301 LGLENCATHTEIKLMKNRDTGLIESAARFAGWNMIPNIKKVFGVDMAKLL 350
BSNT_05771___ 351 LDVLCFGKDADLPDGLLDQEPYYVADCHLYPQHFKQNGQIPETAEDLVIE 400
:|||..||.||||..||....:|:|||||||||||::|.||.....:.|:
BPUM_3423___b 351 IDVLVDGKKADLPKELLSGHTHYIADCHLYPQHFKESGHIPPEVTHITID 400
BSNT_05771___ 401 AIDIPDGLLKGDTEIVSFSAAAPGTSVDLTLFEAFNSIAAFELKGSNSQD 450
.:.||...|.|||.|:|.||...||.|||:||||||.|.:.|||||:|||
BPUM_3423___b 401 HVYIPQDTLVGDTVIISESAPPKGTFVDLSLFEAFNGIVSLELKGSSSQD 450
BSNT_05771___ 451 VAESIRQIQQHAKLTAKYVLPV- 472
||.|||.||:.|.:.....|..
BPUM_3423___b 451 VAASIRNIQKQASIQLMDELVKG 473
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.