Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05773 and BPUM_3422

See DNA alignment / Visit BSNT_05773 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:20
# Commandline: needle
#    -asequence pep-align/BSNT_05773___ywfD.1.24716.seq
#    -bsequence pep-align/BPUM_3422___bacC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05773___ywfD-BPUM_3422___bacC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05773___ywfD-BPUM_3422___bacC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05773___ywfD
# 2: BPUM_3422___bacC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     179/255 (70.2%)
# Similarity:   208/255 (81.6%)
# Gaps:           2/255 ( 0.8%)
# Score: 921.0
# 
#
#=======================================

BSNT_05773___      1 MIMNLTDKTVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVRK     50
                       |||..|.|||||||||||.|||:.||...|.|.||||:|..|:.:|..
BPUM_3422___b      1 --MNLAGKVVLITGGASGIGLAAVKLFLEHGAIVAVADINEKSGKQLVES     48

BSNT_05773___     51 ENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLINNAGIEIVAPIHE    100
                     ..::.|.|.:||||:|:.||..|:|.::.||.:||||||||||||:|:||
BPUM_3422___b     49 LPHEHLAFFKTDITNESDCQKTVQSVLNQFGTIDVLINNAGIEIVSPVHE     98

BSNT_05773___    101 MELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPD    150
                     |.|.|||.::||||||:||||||.|.|||....|:||||.||||||.|||
BPUM_3422___b     99 MTLEDWNHIVQVNLTGVFLMSKHTLPHMLEKKSGSIINTGSVGGLVGWPD    148

BSNT_05773___    151 IPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEKSFLENN    200
                     ||||||:||||:|||||||||||.|||||||:.|||||||||||||::|:
BPUM_3422___b    149 IPAYNATKGGVIQLTKSMAVDYAAHQIRVNCIAPGIIDTPLNEKSFVDNH    198

BSNT_05773___    201 EGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADG    250
                     ..:||.:||||||||||.|||||||||.||||||||||||||||.:||||
BPUM_3422___b    199 SESLEVVKKEKAKVNPLRRLGKPEEIAGVMLFLASDLSSYMTGSVVTADG    248

BSNT_05773___    251 GYTAQ    255
                     ||||:
BPUM_3422___b    249 GYTAR    253


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