Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05775 and BPUM_3420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:21
# Commandline: needle
# -asequence pep-align/BSNT_05775.1.24716.seq
# -bsequence pep-align/BPUM_3420___bacA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05775-BPUM_3420___bacA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05775-BPUM_3420___bacA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05775
# 2: BPUM_3420___bacA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 64/204 (31.4%)
# Similarity: 80/204 (39.2%)
# Gaps: 108/204 (52.9%)
# Score: 347.0
#
#
#=======================================
BSNT_05775 0 -------------------------------------------------- 0
BPUM_3420___b 1 MILKNDVFHFKEEPIVSPKMFTVNTLGPKGTSSEYAAKHFISHSTTTLGT 50
BSNT_05775 0 -------------------------------------------------- 0
BPUM_3420___b 51 QTKLSLYDSFETCIEHTLSHALQYTLVPHAYEGIKHFYMRPDLQLLQIFR 100
BSNT_05775 1 ----MYGLAVRPDFEFRDDMLDTSVIVSHPSPINLIKYFTRKDVRFKLVN 46
||||||||||.|.:.||....|||||:|:|||:||..::..|:|||
BPUM_3420___b 101 CDTPMYGLAVRPDFPFHEQMLHHLKIVSHPAPVNLIQYFIHQNAEFELVN 150
BSNT_05775 47 STSQAARKVKEGLYDIALTNELARQKYGLTFVKTFKSIPMSWSLFGKGDV 96
|||.||:||::|.:|.|||||:||..||||||:||||||||||:||||::
BPUM_3420___b 151 STSTAAQKVRDGEFDFALTNEVARVTYGLTFVRTFKSIPMSWSIFGKGEI 200
BSNT_05775 97 DDEN 100
BPUM_3420___b 200 ---- 200
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