Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05777 and BPUM_3419
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:21
# Commandline: needle
# -asequence pep-align/BSNT_05777___ywfA.1.24716.seq
# -bsequence pep-align/BPUM_3419___ywfA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05777___ywfA-BPUM_3419___ywfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05777___ywfA-BPUM_3419___ywfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05777___ywfA
# 2: BPUM_3419___ywfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 262/412 (63.6%)
# Similarity: 323/412 (78.4%)
# Gaps: 2/412 ( 0.5%)
# Score: 1384.0
#
#
#=======================================
BSNT_05777___ 1 MNSNQNNDIKTKHHFPLLLALALTMGVFAAGSEELVISPLLPDLAKAFNS 50
..::.|.:....||:.||:|||:|||||||||||||||||||:.:|..
BPUM_3419___y 1 --MKESLDSQASQTFPITLAIALTLGVFAAGSEELVISPLLPDLSNSFQH 48
BSNT_05777___ 51 DVSVLALSISIYGIMIFIGAPLLVPLGDKYSRELSLLAGLMIFIIGTVIC 100
.:.:|||||||||:.:.:||||||||||:|||||.|:.||..|:||||:|
BPUM_3419___y 49 SLDILALSISIYGLAVLVGAPLLVPLGDRYSRELCLIIGLSFFLIGTVMC 98
BSNT_05777___ 101 ALAQNIFFFFLGRALSGLAAGAFVPTAYAVVGDRVPYTYRGKVMGLIVSS 150
|.|.|:..||.|||:||||.|.|||||||:|||||||.||||||||||||
BPUM_3419___y 99 AAAPNLGVFFAGRAISGLATGVFVPTAYALVGDRVPYEYRGKVMGLIVSS 148
BSNT_05777___ 151 WSLALIFGVPLGSFIGGVLHWRWTFWIFALMGVLVVLLILLEMRRHAQHK 200
|||:|:.|||:|:|||..|:|||||||||.|.:.|:||::||.|:.....
BPUM_3419___y 149 WSLSLVLGVPIGAFIGQSLNWRWTFWIFAFMSLFVLLLVILESRKQTATA 198
BSNT_05777___ 201 NSGKEEIEEPAGTFRDALKVPRVPVYITITFCNMIGFYGMYSFLGTYLQD 250
|:...:.:|.||:...|||:.|||.|:|:|||||:||||||||||.|||.
BPUM_3419___y 199 NTRTPQAKEKAGSLWGALKIDRVPAYLTVTFCNMLGFYGMYSFLGAYLQS 248
BSNT_05777___ 251 VFTGGNTAAGLFIMIYGIGFSMSVITGKIADRIGKMRSLLIALGVISVLL 300
:|:||.:.|||.||.||:||||||.|||:||..||.|||...||.|:::|
BPUM_3419___y 249 LFSGGQSTAGLLIMAYGVGFSMSVFTGKLADWFGKTRSLFFVLGGITLVL 298
BSNT_05777___ 301 ACLPYAPASMFLLIASLFIWGLMQSLTVTLLSTILSDCSERHRGKVMVFY 350
|.|||||.|..|||.:|||||.||||:||||||:|||||:.||||||.||
BPUM_3419___y 299 ALLPYAPFSWTLLIFALFIWGAMQSLSVTLLSTVLSDCSQTHRGKVMAFY 348
BSNT_05777___ 351 SLASNLAVTLGSALMGPVYVAYGYAAVGLICAAITVLGFVLSVFAYKKYG 400
||||||||.|||||||||||.:||..|||:||.||::||::|..:||:..
BPUM_3419___y 349 SLASNLAVMLGSALMGPVYVHFGYHTVGLLCALITLVGFLISFVSYKRER 398
BSNT_05777___ 401 KLEQKADQSLSQ 412
.|:||...::..
BPUM_3419___y 399 TLQQKHKNTIET 410
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