Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05777 and BPUM_3419
See
Amino acid alignment /
Visit
BSNT_05777 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:21
# Commandline: needle
# -asequence dna-align/BSNT_05777___ywfA.1.24716.seq
# -bsequence dna-align/BPUM_3419___ywfA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05777___ywfA-BPUM_3419___ywfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05777___ywfA-BPUM_3419___ywfA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05777___ywfA
# 2: BPUM_3419___ywfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1316
# Identity: 836/1316 (63.5%)
# Similarity: 836/1316 (63.5%)
# Gaps: 160/1316 (12.2%)
# Score: 2291.0
#
#
#=======================================
BSNT_05777___ 1 ATGAACAGCAATC--AAAACAATGACA------TCAAAACAAAACATCAT 42
||||| || |||| .|.||| |.|| ||||| |||
BPUM_3419___y 1 ATGAA-AG-AATCTTTAGACA--GCCAGGCTTCTCAAA---------CAT 37
BSNT_05777___ 43 TTTCCGTTATTGTTGGCACTG-GCTTTAACGATGGGGGTATTTGCAGCCG 91
||.||.|.|...|||.||.|| || |.||..|.||.||.|||||.||.|
BPUM_3419___y 38 TTCCCATCACACTTGCCATTGCGC--TGACACTTGGCGTCTTTGCGGCGG 85
BSNT_05777___ 92 GATCTGAAGAGCTTGTGATCTCACCGCTGCTGCCGGATTTAGCAAAAGCC 141
||||.|||||.||.|||||.|||||.|||||.||.||||||.||||..||
BPUM_3419___y 86 GATCGGAAGAACTGGTGATTTCACCACTGCTACCTGATTTATCAAACTCC 135
BSNT_05777___ 142 -TTCA--ACTCAGATGTCAGCGTCCTTGCGTTATCTATCAGTATTTACGG 188
|||| ||||...||..| |.||.||..|.||.|||||.|||||.||
BPUM_3419___y 136 TTTCAGCACTCTCTTGATA---TTCTCGCTCTTTCCATCAGCATTTATGG 182
BSNT_05777___ 189 CATTA----TGATTTTTATCGGTGCGCCGCTTTTGGTTCCATTAGGCGAT 234
.||| ||.|..|| ||.||.||.||..|.|||||.|||||.||.
BPUM_3419___y 183 -GTTAGCTGTGCTGGTT---GGAGCCCCACTGCTTGTTCCTTTAGGGGAC 228
BSNT_05777___ 235 AAATACTCCAGAGA------ACTGAGCTTATTGGCCGGGCTTATGATCTT 278
...||.||.||.|| .||||.|.| |||.|||....||||
BPUM_3419___y 229 CGGTATTCAAGGGAGCTATGTCTGATCAT------CGGTCTTTCTTTCTT 272
BSNT_05777___ 279 TATCATAGGAACCGTGATATGCGCTTTGGCT----CAAAATATTTTTTTC 324
|.|.||.||.||||||||.||.|| |||| |.|| |||...|
BPUM_3419___y 273 TTTGATCGGGACCGTGATGTGTGC---GGCTGCCCCGAA----TTTGGGC 315
BSNT_05777___ 325 TTCTTTTT---AGGCCGGGCGCTTTC-GGGATTGGCTGCGGGAGCGTTTG 370
.|.||||| .|||||.||..|.|| |||.|| ||..|.||.|..||||
BPUM_3419___y 316 GTGTTTTTTGCCGGCCGTGCTATATCTGGGCTT-GCAACCGGTGTATTTG 364
BSNT_05777___ 371 TTCCGACCGCTTACGCAGTTGTCGGTGATCGTGTTCCTTATACATACCGG 420
|.||.|||||.||.||..|||||||.||.||.||.||||||..|||.||.
BPUM_3419___y 365 TGCCAACCGCCTATGCGCTTGTCGGCGACCGGGTGCCTTATGAATATCGA 414
BSNT_05777___ 421 GGCAAGGTGATGGGACTGATCGTTTCAAGCTGGTCGCTGGCGCTGATTTT 470
|||||.|||||||||||.||.||.||.||.|||||.||..|.||..|..|
BPUM_3419___y 415 GGCAAAGTGATGGGACTCATTGTGTCGAGTTGGTCTCTTTCTCTTGTCCT 464
BSNT_05777___ 471 CGGAGTGCCGCTCGGATCATTTATC-GGCGGCGTCCTGCATTGGAGATGG 519
.||.||.||..|.||..|.||.||| |||.|.|| .|..|.|||.|||||
BPUM_3419___y 465 TGGTGTACCAATTGGCGCCTTCATCGGGCAGAGT-TTAAACTGGCGATGG 513
BSNT_05777___ 520 ACGTTTTGGATTTTCGCCCTGATGGGTGTTTTAGTTGTCCTGCTGATTC- 568
||.|||||||||||||||.|.|||.||.|.| |||||||||| |.||
BPUM_3419___y 514 ACCTTTTGGATTTTCGCCTTCATGAGTCTCT---TTGTCCTGCT-ACTCG 559
BSNT_05777___ 569 ---TCCTTGAAATGCG--------CCGCCATGCCCAACATAAAAACAGCG 607
||||||||...|| ||||||...|.||.|.||.|||| |.
BPUM_3419___y 560 TCATCCTTGAATCTCGTAAACAAACCGCCACAGCGAATACAAGAACA-CC 608
BSNT_05777___ 608 GCAAG----GAAGAAATAGAAGAGCCGGCAGGAACATTCCGGGATGCGCT 653
.|||| |.||||| ||.||..|.||..|||..||..|
BPUM_3419___y 609 TCAAGCTAAGGAGAAA-----------GCTGGCTCTTTATGGGGAGCTTT 647
BSNT_05777___ 654 GAAAGTCCCTCGTGTACCTGTTTATATCACGATAACCTTCTGTAATATGA 703
.|||.|...||||||.||.|..|||.|.||..|.||.||.|||||||||.
BPUM_3419___y 648 AAAAATTGATCGTGTCCCCGCCTATTTGACTGTGACATTTTGTAATATGC 697
BSNT_05777___ 704 TTGGTTTTTACGGTATGTATTCCTTTTTAGGCACCTATCTTCAGGACGTT 753
||||.|||||.||.|||||.||.||||||||..|.|||.|.|| |.|||
BPUM_3419___y 698 TTGGATTTTATGGCATGTACTCATTTTTAGGAGCGTATTTGCA--AAGTT 745
BSNT_05777___ 754 --TTTACCGGAGGAAACACGGCTGCGGGCTTATTTATCATGATTTATGGA 801
|||.|.||||||.|..|..|.||.|||.|..|.||||||..||||||.
BPUM_3419___y 746 TATTTTCTGGAGGACAATCAACCGCTGGCCTTCTGATCATGGCTTATGGC 795
BSNT_05777___ 802 ATCGGGTTTTCCATGAGTGTGATTACAGGAAAGATAGCCGACCGCATCGG 851
.||||.|||||.||||||||..|||||||.||..||||.|||.|..|.||
BPUM_3419___y 796 GTCGGCTTTTCTATGAGTGTATTTACAGGGAAATTAGCAGACTGGTTTGG 845
BSNT_05777___ 852 AAAAATGCGCTCCCTTTTGATTGCGCTGGGGGTCATCA---GCGTTCTGC 898
.||||..||.||.||.||..|||.||||||.|.|||.| .||||||
BPUM_3419___y 846 CAAAACTCGTTCTCTATTTTTTGTGCTGGGCGGCATTACACTCGTTCT-- 893
BSNT_05777___ 899 TGGCGTGTT--TACCATATGCGCCGGCGTCT-ATG----TTTCTGTTAAT 941
||..|| |.||.|||||.|| ..||| ||| ||.|||.|..|
BPUM_3419___y 894 ---CGCCTTACTTCCTTATGCTCC--TTTCTCATGGACATTGCTGATTTT 938
BSNT_05777___ 942 CGCCAGCCTATTTATTTGGGGATTAATGCAAAGTTTGACGGTGACGCTGC 991
.|| |||||||||||||||....|||||||||||..|.||.|||||..
BPUM_3419___y 939 TGC---CCTATTTATTTGGGGTGCCATGCAAAGTTTATCTGTCACGCTTT 985
BSNT_05777___ 992 TCAGCACCATTTTGAGTGACTGCT--CAGAGCGTCATCGAGGAAAAGTCA 1039
|.|||||..||||.|||||||||| ||.|.| ||.|||||.|||||.|
BPUM_3419___y 986 TGAGCACTGTTTTAAGTGACTGCTCCCAAACC--CACCGAGGCAAAGTGA 1033
BSNT_05777___ 1040 TGGTGTTTTACAGTCTCGCCTCGAATCTGGCCGTGACATTAGGTTCTGCT 1089
|||..||||||||.||.||.||.|||||.|||||.|...|.|||||.|||
BPUM_3419___y 1034 TGGCATTTTACAGCCTTGCGTCAAATCTTGCCGTTATGCTTGGTTCCGCT 1083
BSNT_05777___ 1090 TTAATGGGACCCGTATATGTGGCA-TACGGCTATGCA-GCTGTCGGATTG 1137
.|.||||||||.||.||||| .|| |.||||||| || .|.||.||..|.
BPUM_3419___y 1084 CTGATGGGACCAGTCTATGT-CCATTTCGGCTAT-CATACGGTAGGGCTT 1131
BSNT_05777___ 1138 ATTTGCGCCGCCATCACAGTCCTCGGATTTGTGCTCAGTGTATTCG-CA- 1185
.|.||.||...|||.||..||.|.||.||| ||.|.|...|||| ||
BPUM_3419___y 1132 CTATGTGCTCTCATTACGCTCGTTGGTTTT---CTTATTAGCTTCGTCAG 1178
BSNT_05777___ 1186 -TATAAAAAGT--ACGGCAAACTT-GAGCAGAAGGCCGATCAGTCCTTAT 1231
||| |||.|| ||| ||.||| .||||||| ..||.| .|.
BPUM_3419___y 1179 CTAT-AAACGTGAACG--AACCTTACAGCAGAA---ACATAA-----AAA 1217
BSNT_05777___ 1232 CTCAAT--AA------ 1239
|.|||| ||
BPUM_3419___y 1218 CACAATTGAAACGTAA 1233
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.