Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00740 and BPUM_3418
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:31
# Commandline: needle
# -asequence pep-align/BSNT_00740.1.24716.seq
# -bsequence pep-align/BPUM_3418.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00740-BPUM_3418.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00740-BPUM_3418.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00740
# 2: BPUM_3418
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 67/206 (32.5%)
# Similarity: 106/206 (51.5%)
# Gaps: 51/206 (24.8%)
# Score: 345.0
#
#
#=======================================
BSNT_00740 1 MFGKHSFLHAFSRELYLSFTKIPEIMCTKSKKK-----------DVEMKL 39
|..|...| :|.||:
BPUM_3418 1 -------------------------MHHKYYHKILFKWNDFWIGEVRMKI 25
BSNT_00740 40 DQIDLNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYT 89
..:|::|:.|||:|:|||||||.:::.||.|:|.||||:||..|||:.|:
BPUM_3418 26 TDVDVHILNELKEDARLSMRELSKRVNLSAPAVAERVRKLEDAGIIEGYS 75
BSNT_00740 90 LEVDQKKLGLPVSCIVEATVKNADYERFKSYIQTLPNIEFCYRIAGAACY 139
::|:.|||||.:.|::|.||.|.:|:||.:::...|...|.||:||.:|:
BPUM_3418 76 VQVNYKKLGLMIDCLLEVTVLNGEYQRFVAFMNQHPRAFFAYRVAGQSCF 125
BSNT_00740 140 MLKINAESLEAVEDFINKTSPYAQTVTHVIFSEIDTKNGRG--------- 180
.:|::..|||.:|.||...|.:.:||:|::.||....:...
BPUM_3418 126 FIKLSVASLEEIEAFIQAVSGFTKTVSHIVLSEHSFSHPVQERVKQIEEP 175
BSNT_00740 180 ------ 180
BPUM_3418 176 EMTVMK 181
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