Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05760 and BPUM_3400

See DNA alignment / Visit BSNT_05760 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_05760___ywfL.1.24716.seq
#    -bsequence pep-align/BPUM_3400.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05760___ywfL-BPUM_3400.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05760___ywfL-BPUM_3400.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05760___ywfL
# 2: BPUM_3400
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     211/281 (75.1%)
# Similarity:   240/281 (85.4%)
# Gaps:           0/281 ( 0.0%)
# Score: 1081.0
# 
#
#=======================================

BSNT_05760___      1 MANQPIDLLMQPKWRVIDQSSLGPLFDAKQSFAMDDTLCMSVGKGVSPAT     50
                     |.|:||:||.|||||:|||||||...|.|||||||||||.|||||:||||
BPUM_3400          1 MKNEPIELLTQPKWRIIDQSSLGLYVDPKQSFAMDDTLCASVGKGLSPAT     50

BSNT_05760___     51 ARSWVHHDTIVLGIQDTRLPFLQDGISLLESEGYRVIVRNSGGLAVVLDD    100
                     |||||||:|||||||||||||||||:.|||.||||||||||||||||||:
BPUM_3400         51 ARSWVHHNTIVLGIQDTRLPFLQDGVKLLEEEGYRVIVRNSGGLAVVLDE    100

BSNT_05760___    101 GVLNISLIFEDEKKGIDIDKGYEAMVELMRRMLRPYNAKIEAYEIEGSYC    150
                     ||||:||||.::|||||||:||:|||||:.|||..|...||||||.||||
BPUM_3400        101 GVLNVSLIFAEQKKGIDIDRGYDAMVELVCRMLSKYEVDIEAYEIVGSYC    150

BSNT_05760___    151 PGSYDLSINGKKFAGISQRRVRGGVAVQIYLCADKSGSERADLIRRFYQA    200
                     ||||||||||||||||||||:|||||||||||||.||.||||||||||.|
BPUM_3400        151 PGSYDLSINGKKFAGISQRRLRGGVAVQIYLCADGSGRERADLIRRFYDA    200

BSNT_05760___    201 ALKDKQNDKKGVYPEIRPETMASLSELLQKDISVQDLMFALLTELKALST    250
                     |||||:.:.|.|:|:|:|:||||||||..:.|....||..||.||:.||.
BPUM_3400        201 ALKDKREEVKAVFPDIQPDTMASLSELTGEPIDCALLMRLLLEELQTLSD    250

BSNT_05760___    251 RLYSAGLSIDEEMEFEKNLARMAERNAKVFG    281
                     :|.::||:.||::|||||:.||.|||.|||.
BPUM_3400        251 QLTASGLNADEQLEFEKNMTRMIERNEKVFS    281


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