Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05738 and BPUM_3389
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence pep-align/BSNT_05738___ywhD.1.24716.seq
# -bsequence pep-align/BPUM_3389___ywhD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05738___ywhD-BPUM_3389___ywhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05738___ywhD-BPUM_3389___ywhD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05738___ywhD
# 2: BPUM_3389___ywhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity: 140/174 (80.5%)
# Similarity: 152/174 (87.4%)
# Gaps: 4/174 ( 2.3%)
# Score: 732.0
#
#
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BSNT_05738___ 1 MEEKKKKSIGFNII-KSDPTDGHGGFGVGALSLDNISPVFVDVEEKEAFV 49
||.||||.|||||| |:|.||||||||.|||||||||||.:|||||||.:
BPUM_3389___y 1 MEGKKKKPIGFNIIKKTDATDGHGGFGAGALSLDNISPVIIDVEEKEAVI 50
BSNT_05738___ 50 DIGAMHARSTVEKGIKFLPNKEEVPNGKPYWLVWVTIDRKEEGPYYAGVT 99
|||||||||.||||||||..|||||||||||||||||||:||||||||||
BPUM_3389___y 51 DIGAMHARSAVEKGIKFLKTKEEVPNGKPYWLVWVTIDRREEGPYYAGVT 100
BSNT_05738___ 100 ACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVDKMDDSSKRVLGEFLK 149
||||||||||||||||||||||||||||||||:|..|||.||:||.:|||
BPUM_3389___y 101 ACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIVVSHMDDVSKKVLADFLK 150
BSNT_05738___ 150 KHDQGLWDRSSDELKTSL-LPENN 172
.|::.||:.|:||||..| :||
BPUM_3389___y 151 SHNEALWEASTDELKEGLAVPE-- 172
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