Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05711 and BPUM_3384

See DNA alignment / Visit BSNT_05711 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_05711___ywiB.1.24716.seq
#    -bsequence pep-align/BPUM_3384___ywiB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05711___ywiB-BPUM_3384___ywiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05711___ywiB-BPUM_3384___ywiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05711___ywiB
# 2: BPUM_3384___ywiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      68/143 (47.6%)
# Similarity:    98/143 (68.5%)
# Gaps:           4/143 ( 2.8%)
# Score: 350.5
# 
#
#=======================================

BSNT_05711___      1 MKQETPITLHVKSVIEDDGN-QEVIEFRTTGFYYVKQNKVYLSYYEEHDL     49
                      ..:..|::|||||::.:.. .|.|||||||.|..|..|.||:|:|||::
BPUM_3384___y      1 -MTQNQISIHVKSVMKPETEPAETIEFRTTGTYQEKNEKTYLTYHEEHEM     49

BSNT_05711___     50 GKVKTIVKVSEGEVLVMRSGAVKMNQRFVKGASTIAKYKMSFGELELKTS     99
                     |:|||:||:||.|:.||||||::|.|||:.|.:|:..|.|.||.|:|...
BPUM_3384___y     50 GQVKTVVKMSEKEIFVMRSGAIQMKQRFLIGETTVTHYTMPFGTLQLDVH     99

BSNT_05711___    100 TKSIQSDLDEEKGRISIAYDMHVGDEQEHLHNMTITYEGGTHA    142
                     |..|  |||.:||.:.|.|||..|::|:|||.::|:|:....:
BPUM_3384___y    100 THGI--DLDVDKGLLHITYDMLTGEDQKHLHTLSISYKEDLRS    140


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