Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03123 and BPUM_3381

See DNA alignment / Visit BSNT_03123 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_03123___yocD.1.24716.seq
#    -bsequence pep-align/BPUM_3381.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03123___yocD-BPUM_3381.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03123___yocD-BPUM_3381.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03123___yocD
# 2: BPUM_3381
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity:     158/328 (48.2%)
# Similarity:   219/328 (66.8%)
# Gaps:           8/328 ( 2.4%)
# Score: 796.0
# 
#
#=======================================

BSNT_03123___      1 MYA-SKLKKGDEIRIVSPATSMSILSNEAKIQAKTALERLGYRVTIAEHA     49
                     ||. |.|:||..:|:::|:.|.||||.|...|||..||.||:.|:..:|.
BPUM_3381          1 MYTPSPLRKGSHLRVIAPSRSASILSEEGIAQAKKRLEALGFTVSFGQHV     50

BSNT_03123___     50 NECNEFDSSSIESRVQDLHAAFFDPGVKAILTTLGGFNSNQLLRYLDYEK     99
                     .||:...|||||.|:.|||.||.|..|..|||.:||||.|:||.|:||:.
BPUM_3381         51 FECDLHSSSSIEHRLSDLHKAFTDDEVDGILTAIGGFNCNELLPYIDYDL    100

BSNT_03123___    100 IKRHPKILCGYSDITALCNAIYQKTGLVTYSGPFFSTFAMKKGLDYTQEY    149
                     |::|||:||||||||||.:||..|..:||||||.||:|.||:|.:.....
BPUM_3381        101 IRQHPKVLCGYSDITALASAITAKCEMVTYSGPHFSSFQMKQGQEEQTAM    150

BSNT_03123___    150 FLSCCASD-DPFEILPSSEWSDDRWFLDQENRRFYPNNGPVVIQEGYAEG    198
                     |.:|..:| :.|::.||::||||.|:|||.||:|:|.... :.|||.|||
BPUM_3381        151 FQACLMNDGESFDVTPSTKWSDDAWYLDQANRQFHPTRWG-IYQEGTAEG    199

BSNT_03123___    199 TLIGGNLCTLNLLQGTEYFPETEHTILLIEDDYMSDIHMFDRDLQSLI-H    247
                     ||.|||||||||||||.:.|:.:..||.:|||.::...||.|||.||: |
BPUM_3381        200 TLYGGNLCTLNLLQGTSFMPQIKDAILFVEDDELAFPEMFARDLTSLLQH    249

BSNT_03123___    248 LPAFSHVKAILIGRFQKASNVSMDLVKAMIETKKELSGIPVIANINAGHT    297
                     ..:   :|.::||||||.|.::.:.:|.:::....|..||||.:::.|||
BPUM_3381        250 AES---IKGLIIGRFQKKSKMTEEHLKFILDKHPMLKHIPVIYDVDIGHT    296

BSNT_03123___    298 SPIATFPIGGTCRIEAISGTSRIWIDKH    325
                     .|:.|.||||..::...:|..::.|.. 
BPUM_3381        297 QPVFTLPIGGNVQLACENGDVKLRIHS-    323


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