Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03596 and BPUM_3372

See DNA alignment / Visit BSNT_03596 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:08
# Commandline: needle
#    -asequence pep-align/BSNT_03596.1.24716.seq
#    -bsequence pep-align/BPUM_3372___mmgB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03596-BPUM_3372___mmgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03596-BPUM_3372___mmgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03596
# 2: BPUM_3372___mmgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     169/288 (58.7%)
# Similarity:   213/288 (74.0%)
# Gaps:           2/288 ( 0.7%)
# Score: 878.0
# 
#
#=======================================

BSNT_03596         1 MEIKQ-IMVAGAGQMGSGIAQTAADAGFYVRMYDVNPEAAEAGLKRLKKQ     49
                     |..:: :||.|||||||||||..|.:|:.|.::|.:.:.....:..:.||
BPUM_3372___m      1 MSTEETVMVVGAGQMGSGIAQVFAQSGYTVLLHDASEKQIHRAISSMTKQ     50

BSNT_03596        50 LARDAEKGKRTETEVKSVISRISISQTLEEAEHADIVIEAIAENMAAKTE     99
                     |.:.|||||.....|:.:..|:::|..|.:.:.|.:||||.:|.|:.|.:
BPUM_3372___m     51 LTKRAEKGKLAHQAVRDITQRLAVSTDLTDVQQAHLVIEAASEQMSVKKQ    100

BSNT_03596       100 MFKTLDRICPPHTILASNTSSLPITEIAAVTNRPQRVIGMHFMNPVPVMK    149
                     :|:|||:.....||.|:|||||.|||:||||.||::||||||||||||||
BPUM_3372___m    101 IFETLDQFAEAKTIFATNTSSLSITELAAVTGRPEQVIGMHFMNPVPVMK    150

BSNT_03596       150 LVEVIRGLATSEETALDVMALAEKMGKTAVEVNDFPGFVSNRVLLPMINE    199
                     ||||||.|.||::|...|...|:.:.||.:||.|||||||||:|:|||||
BPUM_3372___m    151 LVEVIRALQTSDDTYQLVCETAKALNKTPIEVEDFPGFVSNRILMPMINE    200

BSNT_03596       200 AIYCVYEGVAKPEAIDEVMKLGMNHPMGPLALADFIGLDTCLSIMEVLHS    249
                     |||.:|||||..|:||.||.||||||||||.|||||||||||.||..||.
BPUM_3372___m    201 AIYTLYEGVADAESIDGVMTLGMNHPMGPLRLADFIGLDTCLFIMNTLHE    250

BSNT_03596       250 GLGDSKYRPCPLLRKYVKAGWLGKKSGRGFYDYEEKTS    287
                     |||||||||||||:|||.|||||||:.:|||.|.:.: 
BPUM_3372___m    251 GLGDSKYRPCPLLKKYVNAGWLGKKTKKGFYTYHDHS-    287


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