Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05673 and BPUM_3358

See DNA alignment / Visit BSNT_05673 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence pep-align/BSNT_05673___spo0F.1.24716.seq
#    -bsequence pep-align/BPUM_3358___spo0F.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05673___spo0F-BPUM_3358___spo0F.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05673___spo0F-BPUM_3358___spo0F.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05673___spo0F
# 2: BPUM_3358___spo0F
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:     113/125 (90.4%)
# Similarity:   120/125 (96.0%)
# Gaps:           2/125 ( 1.6%)
# Score: 572.0
# 
#
#=======================================

BSNT_05673___      1 MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDL     50
                      ||||||||||||||||||||||:|||||||||||||||||||...||:|
BPUM_3358___s      1 -MNEKILIVDDQYGIRILLNEVFHKEGYQTFQAANGLQALDIVKNHRPNL     49

BSNT_05673___     51 VLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALT    100
                     ||||||||||||||||||||:|||:|||||||||||||||||||||||||
BPUM_3358___s     50 VLLDMKIPGMDGIEILKRMKLIDEDIRVIIMTAYGELDMIQESKELGALT     99

BSNT_05673___    101 HFAKPFDIDEIRDAVKKYLPLKSN-    124
                     ||||||||||||||||:||||::| 
BPUM_3358___s    100 HFAKPFDIDEIRDAVKEYLPLETNG    124


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