Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05658 and BPUM_3349
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence pep-align/BSNT_05658___tdk.1.24716.seq
# -bsequence pep-align/BPUM_3349___tdk.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05658___tdk-BPUM_3349___tdk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05658___tdk-BPUM_3349___tdk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05658___tdk
# 2: BPUM_3349___tdk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 150/200 (75.0%)
# Similarity: 171/200 (85.5%)
# Gaps: 5/200 ( 2.5%)
# Score: 804.0
#
#
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BSNT_05658___ 1 MYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRY 50
||:||||||||:||||||||||||||||.||||:|||||::|||.|||||
BPUM_3349___t 1 MYVMKQSGWLEVICGSMFSGKSEELIRRAKRATFAKQEVKIFKPAIDNRY 50
BSNT_05658___ 51 SEAAVVSHNGTSMTSYAISSAADIWDHISESTDVIAVDEVQFFDQEIVEV 100
|.::||||||:|:...|::|..||..||||.||||.:|||||||:.|:::
BPUM_3349___t 51 STSSVVSHNGSSVDGIAVASPKDIITHISERTDVIGIDEVQFFDETIIDI 100
BSNT_05658___ 101 LSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGS 150
::.|||||||||.||||.|||||||||||::||.||.|||||||||||||
BPUM_3349___t 101 VTQLADKGYRVIVAGLDQDFRGEPFGVVPHLMACAELVTKLQAVCSVCGS 150
BSNT_05658___ 151 PASRTQRLIDGKPASYDDPVILVGASESYEARCRHHHEVPGKSKK----- 195
|||||||||||||||||||:|||||.||||||||||||||.....
BPUM_3349___t 151 PASRTQRLIDGKPASYDDPIILVGAQESYEARCRHHHEVPRLDVGTTLDN 200
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