Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05655 and BPUM_3347
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence pep-align/BSNT_05655___ywkB.1.24716.seq
# -bsequence pep-align/BPUM_3347___ywkB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05655___ywkB-BPUM_3347___ywkB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05655___ywkB-BPUM_3347___ywkB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05655___ywkB
# 2: BPUM_3347___ywkB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 247/319 (77.4%)
# Similarity: 283/319 (88.7%)
# Gaps: 1/319 ( 0.3%)
# Score: 1222.0
#
#
#=======================================
BSNT_05655___ 1 MSILDILILLAPIFFVIVLGWFAGHFGSYDAKSAKGVSTLVTKYALPAHF 50
|..|:||||||||||||.||||||:|||||||||||||||||||||||||
BPUM_3347___y 1 MDFLNILILLAPIFFVIALGWFAGNFGSYDAKSAKGVSTLVTKYALPAHF 50
BSNT_05655___ 51 IAGILTTSRSEFLSQVPLMISLIIGIVGFYIIILLVCRFIFKYDLTNSSV 100
||.||:|.:.:|.||:|..::||.||||||||||||.:|.||||||:|||
BPUM_3347___y 51 IASILSTPKDKFYSQIPFFVALIFGIVGFYIIILLVTKFAFKYDLTDSSV 100
BSNT_05655___ 101 FSLNSAQPTFAFMGIPVLGSLFGANEVAIPIAVTGIVVNAILDPLAIIIA 150
||||||||||||||||||||||||.|||||||:|||||||:|||:|||::
BPUM_3347___y 101 FSLNSAQPTFAFMGIPVLGSLFGAQEVAIPIAITGIVVNALLDPIAIIVS 150
BSNT_05655___ 151 TVGESSKKNEESGDSFWKMTGKSILHGLCEPLAAAPLISMILVLVFNFTL 200
||||.:|...:.|:||.|||.|:|||||.||||.|||.|:||||: .|.|
BPUM_3347___y 151 TVGEKTKGKAKDGESFLKMTTKAILHGLSEPLALAPLASIILVLL-GFKL 199
BSNT_05655___ 201 PELGVKMLDQLGSTTSGVALFAVGVTVGIRKIKLSMPAIGIALLKVAVQP 250
||:|.:||:::||.|||||||||||||||||||||:||..||||||||||
BPUM_3347___y 200 PEIGHEMLEEIGSVTSGVALFAVGVTVGIRKIKLSLPAFSIALLKVAVQP 249
BSNT_05655___ 251 ALMFLIALAIGLPADQTTKAILLVAFPGSAVAAMIATRFEKQEEETATAF 300
.||:|||:.:||.||:.|||:||||||||||||||||||||||.|||:||
BPUM_3347___y 250 LLMYLIAILMGLSADEITKAVLLVAFPGSAVAAMIATRFEKQEAETASAF 299
BSNT_05655___ 301 VVSAILSLISLPIIIALTA 319
|:|||:|||:||||||||.
BPUM_3347___y 300 VISAIMSLITLPIIIALTV 318
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