Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05652 and BPUM_3345
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence pep-align/BSNT_05652___prfA.1.24716.seq
# -bsequence pep-align/BPUM_3345___prfA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05652___prfA-BPUM_3345___prfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05652___prfA-BPUM_3345___prfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05652___prfA
# 2: BPUM_3345___prfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity: 319/356 (89.6%)
# Similarity: 342/356 (96.1%)
# Gaps: 1/356 ( 0.3%)
# Score: 1640.0
#
#
#=======================================
BSNT_05652___ 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQ 50
|||||||||||||||||.||||||||||.||||||||||||||||:||||
BPUM_3345___p 1 MLDRLKSIEERYEKLNEYLSDPEVVNDPTKLREYSKEQSDIQETVEVYRQ 50
BSNT_05652___ 51 YRDASEQLADAKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKVLLI 100
||.|.:||::||||||:|||||||||||||||||.:|||.|.:.||:|||
BPUM_3345___p 51 YRAAYDQLSEAKAMLEDKLDAEMRDMVKEEISELTEETERLEDELKILLI 100
BSNT_05652___ 101 PKDPNDDKNVIMEIRGAAGGEEAALFAGNLYRMYSRYAELQGWKTEVMEA 150
||||||:||||:|:|||||||||||||||||||||||||:||||||||||
BPUM_3345___p 101 PKDPNDNKNVIVEVRGAAGGEEAALFAGNLYRMYSRYAEMQGWKTEVMEA 150
BSNT_05652___ 151 NVTGTGGYKEIIFMITGSGAYSKLKYENGAHRVQRVPETESGGRIHTSTA 200
:||||||||||||||:|.|||||||:||||||||||||||||||||||||
BPUM_3345___p 151 SVTGTGGYKEIIFMISGKGAYSKLKFENGAHRVQRVPETESGGRIHTSTA 200
BSNT_05652___ 201 TVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPTG 250
|||.||||||||:||||||||||||.||||||||||||||||||||||||
BPUM_3345___p 201 TVAVLPEAEEVEIDIHEKDIRVDTFTSSGPGGQSVNTTMSAVRLTHLPTG 250
BSNT_05652___ 251 VVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSGD 300
|||||||||||||||||||||||||||||||:|||||||||||||||:||
BPUM_3345___p 251 VVVSCQDEKSQIKNKEKAMKVLRARIYDKFQREAQAEYDQTRKSAVGTGD 300
BSNT_05652___ 301 RSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASK 350
||||||||||||||||||||||||||||||||||||||::|||:||||.|
BPUM_3345___p 301 RSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQARK 350
BSNT_05652___ 351 LQQSEG 356
||.::
BPUM_3345___p 351 LQNAK- 355
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