Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05651 and BPUM_3344

See DNA alignment / Visit BSNT_05651 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_05651___ywkE.1.24716.seq
#    -bsequence pep-align/BPUM_3344___hemK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05651___ywkE-BPUM_3344___hemK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05651___ywkE-BPUM_3344___hemK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05651___ywkE
# 2: BPUM_3344___hemK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     163/295 (55.3%)
# Similarity:   206/295 (69.8%)
# Gaps:           7/295 ( 2.4%)
# Score: 813.0
# 
#
#=======================================

BSNT_05651___      1 ----MKTIFEALKWASSYLTEAGREENAAELLLLYDTGMERSKLLASLQE     46
                         .:|||||||||||.||||||::|||||||::...:.||:|||...:
BPUM_3344___h      1 MQNNQRTIFEALKWASSLLTEAGRDQNAAELLLMHVLDLSRSELLARFHD     50

BSNT_05651___     47 PIGEDELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRPET     96
                     .:.:::...|:..|..||:|||||::||.||||||.|.||..||||||||
BPUM_3344___h     51 QLPDEQDRLFREFVTQHKKGVPVQHLIGIEFFYGRPFEVNKHVLIPRPET    100

BSNT_05651___     97 EEVVFHLLEKYRSVFSEDGKLEVVDVGTGSGAIAVTLALENQSFSVSAVD    146
                     ||||...|.....:|..|..|:.|||||||||||:|||||.::.||:|.|
BPUM_3344___h    101 EEVVLAALNLMSDIFPHDQPLKAVDVGTGSGAIAITLALEKETLSVTATD    150

BSNT_05651___    147 ISKEALQVASANAEKLGANVRFYQGDLLEPFIKAGKKADIIVSNPPYISE    196
                     ||.|||.||..|.:.|||:|.|.|||||||....|.|.|:.:||||||:.
BPUM_3344___h    151 ISHEALAVAKRNQQALGADVHFLQGDLLEPIKDQGIKVDLFISNPPYIAA    200

BSNT_05651___    197 EEMADLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEI    246
                     :||..|||:|..|||::|||||.|||.||||.:.|:..|:.::..|||||
BPUM_3344___h    201 DEMGGLSEVVTKHEPVNALTDGRDGLWFYKRLVRDLHHVLHEQAVVVFEI    250

BSNT_05651___    247 GWKQGAAVKDLILKAFKGAEVEVLKDINGKDRTICALIHKNK---    288
                     |.||...||.|:|::|..|:|.::||||||||.:||.|....   
BPUM_3344___h    251 GHKQAQDVKTLLLQSFPAADVRIVKDINGKDRAVCAHIKTESPAE    295


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