Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05651 and BPUM_3344
See
Amino acid alignment /
Visit
BSNT_05651 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence dna-align/BSNT_05651___ywkE.1.24716.seq
# -bsequence dna-align/BPUM_3344___hemK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05651___ywkE-BPUM_3344___hemK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05651___ywkE-BPUM_3344___hemK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05651___ywkE
# 2: BPUM_3344___hemK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 957
# Identity: 566/957 (59.1%)
# Similarity: 566/957 (59.1%)
# Gaps: 159/957 (16.6%)
# Score: 1455.5
#
#
#=======================================
BSNT_05651___ 1 -------ATGA--AG---ACGATATTCGAAGCCCTGAAATGGGCTTCTTC 38
||.| || ||.||.||.||||||||.||||||||||||||
BPUM_3344___h 1 ATGCAAAATAATCAGCGAACCATCTTTGAAGCCCTTAAATGGGCTTCTTC 50
BSNT_05651___ 39 TTATTTAACCGAAGCGGGAAGAGAAGAAAATGCGGCCGAGCTCCTATTGC 88
||..|||||.|||||.||.|||||..||||.||.||.|||||.||.|||.
BPUM_3344___h 51 TTTGTTAACGGAAGCCGGTAGAGACCAAAACGCAGCAGAGCTTCTTTTGA 100
BSNT_05651___ 89 TTTATGATACCGGAATGGAG-AGAAGCAAGCTGCTCGCAAGCTTACAGGA 137
|..||| ||..|||....|| |||||..|.||.||.|||.|.||.||.||
BPUM_3344___h 101 TGCATG-TATTGGACCTAAGCAGAAGTGAACTTCTTGCACGTTTTCATGA 149
BSNT_05651___ 138 ACCGATT----GGTGAAGACGAACTG-TAT--CGC---TTTAAGCGTCAC 177
.|.| || |.|||..|.||.|.| ||| ||| ||| |||||
BPUM_3344___h 150 TCAG-TTGCCAGATGAGCAAGATCGGTTATTCCGCGAGTTT----GTCAC 194
BSNT_05651___ 178 GTTGAGATGCATAAAGAGGGCGTGCCGGTTCAATACATTATAGGAAAAGA 227
|..|||.||..|.||||||||.||||||.|..|.|||||.|..||
BPUM_3344___h 195 -----GCAGCACAAGAAAGGCGTGCCAGTTCAACATCTAATAGGTATTGA 239
BSNT_05651___ 228 GTTTTTTTATGGACGGGAATTTATGGTGAATGATGATGTGCTGATCCCGC 277
.||||||||.||.||....||...||||||..|..||||.||.||.||.|
BPUM_3344___h 240 ATTTTTTTACGGCCGTCCCTTCGAGGTGAACAAACATGTTCTCATTCCTC 289
BSNT_05651___ 278 GGCCGGAAACTGAAGAAGTTGTCTTT----------CATTTGCTTGAAAA 317
|.||.|||||.|||||.||.|| ||| .|||||.|
BPUM_3344___h 290 GACCTGAAACGGAAGAGGTCGT-TTTGGCGGCGCTGAATTTGAT------ 332
BSNT_05651___ 318 ATATCGGAGTG---TTTTTTCTGAAGA-CGGCAAGCTCGAAGTTGTTGAC 363
||||| |.||..|..|.|| |.|| .||||.|||..||.|||
BPUM_3344___h 333 ------GAGTGACATCTTCCCGCACGATCAGC-CGCTCAAAGCAGTGGAC 375
BSNT_05651___ 364 GTTGGTACAGGGAGCGGCGCAATAGCCGTCACGCTTGCGCTTGAAAACCA 413
||.||||||||.|||||.|||||.||..|.|||||.||.|||||.||..|
BPUM_3344___h 376 GTGGGTACAGGAAGCGGGGCAATTGCGATTACGCTCGCTCTTGAGAAAGA 425
BSNT_05651___ 414 AAGCTTTTCTGTGTCGGCGGTCGATATTTCGAAAGAGGCGCTGCAAGTCG 463
||...|.|||||..|.|||...||||||||..|.||.||.||
BPUM_3344___h 426 AACACTGTCTGTCACAGCGACGGATATTTCACATGAAGCACT-------- 467
BSNT_05651___ 464 CCTCTGC-----CAATGCAGAAAAA-------CTCGGAGCGAATGTGCGC 501
||| |||.||.|||..| ||.||.||..||||.|..
BPUM_3344___h 468 ----TGCGGTAGCAAAGCGGAATCAACAAGCGCTTGGTGCAGATGTCCAT 513
BSNT_05651___ 502 TTTTATCAGGGCGATCTGCTTGAGCCTTT----TATTAAGGCGGGAAAAA 547
||||..||.||.||..|.||.||.||..| .||.||||| |..|
BPUM_3344___h 514 TTTTTACAAGGGGACTTACTCGAACCGATCAAGGATCAAGGC----ATCA 559
BSNT_05651___ 548 AAGCGGATATCATTGTCTCAAACCCGCCATATATTTCAGAGGAAGAAATG 597
|||.||||.|..||.|.||.||||||||.||||||.|.|..||.||||||
BPUM_3344___h 560 AAGTGGATCTGTTTATTTCTAACCCGCCTTATATTGCGGCAGACGAAATG 609
BSNT_05651___ 598 GCTGATTTATCGGAAATTGTC-CGTTTTCATGAGCCGCTGCACGCACTCA 646
|..|.|||.||.||..|.||| || ...||||||||..|..|.||.||.|
BPUM_3344___h 610 GGCGGTTTGTCAGAGGTGGTCACG-AAGCATGAGCCAGTAAATGCGCTGA 658
BSNT_05651___ 647 CCGATGGCGGAGACGGGCTGAAATTTTATAAGCG----GTTTATGGAAGA 692
|.|||||..|.||.||..||...|||||.||||| |||..| ||
BPUM_3344___h 659 CAGATGGACGTGATGGTTTGTGGTTTTACAAGCGTCTCGTTCGT----GA 704
BSNT_05651___ 693 CATTCCGCTTG----TTATGA--AGGATAAAGTATTTGTCGTT---TTTG 733
..|||..|.|| |.|||| ||| ..|||||| ||||
BPUM_3344___h 705 TCTTCACCATGTACTTCATGAGCAGG---------CGGTCGTTGTCTTTG 745
BSNT_05651___ 734 AAATCGGCTGGAAACAGGGAGCG---GCGGTCAAAGAC-CTGATCCTCAA 779
|||||||....||.|| |||| |..|| |||.|| ||..||.|..|
BPUM_3344___h 746 AAATCGGACATAAGCA---AGCGCAAGATGT-AAAAACACTTCTCTTGCA 791
BSNT_05651___ 780 GGCATTTAAGGGAGCGGAAGTGGAAGTGC------TGAAAGATATTAATG 823
|.||||| ...||||.| ||.||.| |.||.||||||||.|
BPUM_3344___h 792 GTCATTT---CCCGCGGCA---GATGTCCGCATCGTCAAGGATATTAACG 835
BSNT_05651___ 824 GAAAAGACAGAACCATATGCGCTCTGATTCATAAAAA------------- 860
|.||||||.||.|..|.||||| |..|||.||||
BPUM_3344___h 836 GGAAAGACCGAGCTGTTTGCGC----ACACATCAAAACGGAAAGTCCGGC 881
BSNT_05651___ 861 TAAATAA 867
|.|||||
BPUM_3344___h 882 TGAATAA 888
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.