Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05647 and BPUM_3342
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence pep-align/BSNT_05647___spoIIR.1.24716.seq
# -bsequence pep-align/BPUM_3342___spoIIR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05647___spoIIR-BPUM_3342___spoIIR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05647___spoIIR-BPUM_3342___spoIIR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05647___spoIIR
# 2: BPUM_3342___spoIIR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 142/228 (62.3%)
# Similarity: 170/228 (74.6%)
# Gaps: 14/228 ( 6.1%)
# Score: 720.0
#
#
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BSNT_05647___ 1 -MKKTVIICIYIFLLLSGALVGLAKEETAQKSENQPVVIPDQAIRLRILA 49
.|..::||:|:||||.||...|.|||||..|.||.|||||:||||||||
BPUM_3342___s 1 MFKSKMMICLYMFLLLCGAFANLGKEETAAASANQHVVIPDEAIRLRILA 50
BSNT_05647___ 50 NSDSDQDQQLKRHIRDAVNKEITTWVKDITSIEEARRVIRSKLPEIKAIA 99
|||...||.:||.|||.||..:|.||||:|||||||||||||||||..||
BPUM_3342___s 51 NSDRSADQDVKRSIRDEVNANMTEWVKDLTSIEEARRVIRSKLPEINRIA 100
BSNT_05647___ 100 KETMEKEGANQSISVDFDKISFPTKLYGNMVYPAGEYEAILITLGNGDGA 149
|..::::..:||:||.|.|.|||||||||.|||||:|||||||||.||||
BPUM_3342___s 101 KAKLKEQHIDQSVSVSFQKASFPTKLYGNFVYPAGKYEAILITLGEGDGA 150
BSNT_05647___ 150 NWWCVLFPPLCFLDFSNGEAV---KEQEDKEASKKQTEKVLEDVTAKAEK 196
||||||||||||:|||||||: :..|:.|.:.:||::.:.: |.|
BPUM_3342___s 151 NWWCVLFPPLCFIDFSNGEAIASPEGDEENEVTAQQTDESVNE----AVK 196
BSNT_05647___ 197 AKKEENKEKEDGTEVKFFLVEWISDLFS 224
.||||. :||||||.:|:|.|||
BPUM_3342___s 197 EKKEET------SEVKFFLFDWVSSLFS 218
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