Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05646 and BPUM_3341

See DNA alignment / Visit BSNT_05646 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_05646___ywlB.1.24716.seq
#    -bsequence pep-align/BPUM_3341___ywlB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05646___ywlB-BPUM_3341___ywlB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05646___ywlB-BPUM_3341___ywlB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05646___ywlB
# 2: BPUM_3341___ywlB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:      71/148 (48.0%)
# Similarity:    97/148 (65.5%)
# Gaps:           2/148 ( 1.4%)
# Score: 326.0
# 
#
#=======================================

BSNT_05646___      1 MFYQLRVAREKDGDVLEAFLKQAKTSYEGVKEGFTQFLMLEDSEKNIAGC     50
                     |:||||:|.|:|...:.|||::.:..........|.|:::||::..:|||
BPUM_3341___y      1 MYYQLRIATEEDAPAINAFLEKGQAKGGVTLAERTTFVVMEDADGQLAGC     50

BSNT_05646___     51 LGIEKISCDQGLLRSLVISDKLHQGHIVTLFQSMEVLCEKHQIKTVYLVA    100
                     ||:|::|..:||||||||||||.|||||:||||::.|..|..:.|.|:||
BPUM_3341___y     51 LGLEQLSEQEGLLRSLVISDKLGQGHIVSLFQSVQTLGGKIGVDTFYVVA    100

BSNT_05646___    101 NQHSSADFLTAMGFERAESVPEELFSSDHFCDSRQTEGA-VLMKKASG    147
                     |..||.|||..|||...|.:||.::.|.|..:....|.| ||.|||| 
BPUM_3341___y    101 NHSSSHDFLALMGFTALEDIPESMWVSAHAKEILAKEQAVVLQKKAS-    147


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.