Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05644 and BPUM_3340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence pep-align/BSNT_05644___ywlC.1.24716.seq
# -bsequence pep-align/BPUM_3340___ywlC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05644___ywlC-BPUM_3340___ywlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05644___ywlC-BPUM_3340___ywlC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05644___ywlC
# 2: BPUM_3340___ywlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 232/351 (66.1%)
# Similarity: 274/351 (78.1%)
# Gaps: 5/351 ( 1.4%)
# Score: 1202.0
#
#
#=======================================
BSNT_05644___ 1 --MKTKRWFVDVTDELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANA 48
:.||||.||:..:|||..|||.|||.||::||||||||||||||||||
BPUM_3340___y 1 MMLNTKRWSVDLEKDLSTYYPQIEQAALLLKQNEVVAFPTETVYGLGANA 50
BSNT_05644___ 49 KNTDAVKKIYEAKGRPSDNPLIVHIADISQLEDLTGPAPEKAKTLMKRFW 98
|.|:||.|||||||||||||||||||::.||.:......|:||.|||.||
BPUM_3340___y 51 KETEAVMKIYEAKGRPSDNPLIVHIAEVEQLHEFAQIESERAKALMKAFW 100
BSNT_05644___ 99 PGALTLILPCKPGALSPRVTAGLDTVAIRMPDHPLALALIRESGLPIAAP 148
|||||::||||.|.||.:|||||.||.:||||||:||.|||.:|||||||
BPUM_3340___y 101 PGALTIVLPCKLGTLSKQVTAGLSTVGVRMPDHPIALELIRTAGLPIAAP 150
BSNT_05644___ 149 SANLSGKPSPTKAEHVAHDLDGRIAGIMDGGPTGIGVESTVLSCADDIPV 198
|||.|||||||:|:|||.|||||||||:|||.|||||||||:||.|:|||
BPUM_3340___y 151 SANRSGKPSPTQADHVASDLDGRIAGIVDGGSTGIGVESTVVSCVDEIPV 200
BSNT_05644___ 199 LLRPGGITKEQIEAVIGPIHVDKGLSDQNEKPISPGMKYTHYAPTAPLAI 248
:|||||||||.:|.|:|.:.:|.||:.::|.|:|||||||||||.|.:.:
BPUM_3340___y 201 ILRPGGITKEALEEVVGTVSIDPGLTKKDEAPVSPGMKYTHYAPEAKMYL 250
BSNT_05644___ 249 CEGSPERIQHLIQEYQQGGRRVGVLTTEENAGVYSADYVKSCGRRAQLET 298
..||.|.:|..||.||..|.:||||||||...:::||.|.|||.|.:.||
BPUM_3340___y 251 FHGSDEELQRHIQTYQTEGLKVGVLTTEEKKSLFAADVVFSCGWREKPET 300
BSNT_05644___ 299 VAAGLYDALRSFDENKVDLIISESFPDTGVGLAIMNRLMKAAGGRVIR-- 346
:||.||..||.|||..||:||||:|...|||.||||||.||||||.:.
BPUM_3340___y 301 IAANLYRVLRQFDETDVDVIISETFSKQGVGSAIMNRLQKAAGGRTLSSF 350
BSNT_05644___ 346 - 346
BPUM_3340___y 351 K 351
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