Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05643 and BPUM_3339
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence pep-align/BSNT_05643___ywlD.1.24716.seq
# -bsequence pep-align/BPUM_3339___ywlD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05643___ywlD-BPUM_3339___ywlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05643___ywlD-BPUM_3339___ywlD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05643___ywlD
# 2: BPUM_3339___ywlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 128/185 (69.2%)
# Similarity: 158/185 (85.4%)
# Gaps: 1/185 ( 0.5%)
# Score: 664.0
#
#
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BSNT_05643___ 1 MSDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGLF 50
|.:| .|||:||||||||||||||||||||||::||.:||.|||.:||:|
BPUM_3339___y 1 MYEL-AGELLTLSIMAFALGMDAFSVGLGMGMIQLRFRQIIYIGLVIGIF 49
BSNT_05643___ 51 HVIMPLAGMAAGNMLSGLLGVLAVYIGGALLFVLGVQMLMASFKQSEERF 100
|:.|||.||..|.:|||.||:||.|||||||.|||:||::||.::.::.|
BPUM_3339___y 50 HMFMPLFGMLTGQLLSGWLGLLATYIGGALLLVLGLQMIIASIRKEDKPF 99
BSNT_05643___ 101 MSPAGPGLLLFAIGVSLDSFSVGLSLGIYGSHPFLTITLFGLFSMMLTWL 150
::|.|.||:|||..||||||||||||||||||.::||.|||.|||:||||
BPUM_3339___y 100 IAPVGAGLVLFATSVSLDSFSVGLSLGIYGSHVWMTILLFGFFSMILTWL 149
BSNT_05643___ 151 GLLVGKQVQSWLGTYSEALGGIILIVFGLKLLLPI 185
|||:||||:||:|:||.|||||||:.||:|||.|:
BPUM_3339___y 150 GLLLGKQVRSWVGSYSGALGGIILLAFGIKLLFPL 184
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