Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05641 and BPUM_3338

See DNA alignment / Visit BSNT_05641 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_05641___ywlE.1.24716.seq
#    -bsequence pep-align/BPUM_3338___ywlE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05641___ywlE-BPUM_3338___ywlE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05641___ywlE-BPUM_3338___ywlE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05641___ywlE
# 2: BPUM_3338___ywlE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:      98/152 (64.5%)
# Similarity:   119/152 (78.3%)
# Gaps:           2/152 ( 1.3%)
# Score: 512.0
# 
#
#=======================================

BSNT_05641___      1 MDIIFVCTGNTCRSPMAEALFKSIAEMEGLNVNVRSAGVFASPNGKATPH     50
                     |.|:|||||||||||||:|||.|||:.:||.|.|:|||:|||..|||:|.
BPUM_3338___y      1 MKILFVCTGNTCRSPMAQALFASIAQDKGLEVTVKSAGIFASDAGKASPQ     50

BSNT_05641___     51 AVEALFEKHIALNHVSSPLTEELMESADLVLAMTHQHKQIIASQFGRYRD    100
                     ||||||||.|.|||.|:.|||:|:..||.|..||.||||:|..|:...:|
BPUM_3338___y     51 AVEALFEKSIPLNHSSAKLTEDLLREADYVFTMTMQHKQLIVEQYAHAKD    100

BSNT_05641___    101 KVFTLKEYVTGSHGDVIDPFGGSIDIYKQTRDELEELLRQLAKQLKKDRR    150
                     |.|||||:.||:.|||.||||||:.:|::||||||.||.|||::|||||.
BPUM_3338___y    101 KTFTLKEFATGAEGDVSDPFGGSLSVYQETRDELEGLLHQLAEKLKKDRT    150

BSNT_05641___    150 --    150
                       
BPUM_3338___y    151 SS    152


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