Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05635 and BPUM_3334
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence pep-align/BSNT_05635___upp.1.24716.seq
# -bsequence pep-align/BPUM_3334___upp.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05635___upp-BPUM_3334___upp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05635___upp-BPUM_3334___upp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05635___upp
# 2: BPUM_3334___upp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 192/209 (91.9%)
# Similarity: 203/209 (97.1%)
# Gaps: 0/209 ( 0.0%)
# Score: 999.0
#
#
#=======================================
BSNT_05635___ 1 MGKVYVFDHPLIQHKLTYIRNENTGTKDFRELVDEVATLMAFEITRDLPL 50
|.||||||||||||||||||:.:||||:||||||||||||||||||||||
BPUM_3334___u 1 MAKVYVFDHPLIQHKLTYIRDVHTGTKEFRELVDEVATLMAFEITRDLPL 50
BSNT_05635___ 51 EEVDINTPVQAAKSKVISGKKLGVVPILRAGLGMVDGILKLIPAAKVGHV 100
||||:.||||.|||.|||||||||||||||||||||||||||||||||||
BPUM_3334___u 51 EEVDVETPVQVAKSNVISGKKLGVVPILRAGLGMVDGILKLIPAAKVGHV 100
BSNT_05635___ 101 GLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEAIHSLKKR 150
||||||:||||||||||||||||||||||||||||||||||||::|||||
BPUM_3334___u 101 GLYRDPKTLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEALNSLKKR 150
BSNT_05635___ 151 GAKNIRFMCLVAAPEGVEELQKHHSDVDIYIAALDEKLNEKGYIVPGLGD 200
||||||||||:||||||||:||||.|||||||||||||||||||:|||||
BPUM_3334___u 151 GAKNIRFMCLIAAPEGVEEMQKHHPDVDIYIAALDEKLNEKGYIIPGLGD 200
BSNT_05635___ 201 AGDRMFGTK 209
|||||:|||
BPUM_3334___u 201 AGDRMYGTK 209
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