Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05627 and BPUM_3330

See DNA alignment / Visit BSNT_05627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence pep-align/BSNT_05627___atpF.1.24716.seq
#    -bsequence pep-align/BPUM_3330___atpF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05627___atpF-BPUM_3330___atpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05627___atpF-BPUM_3330___atpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05627___atpF
# 2: BPUM_3330___atpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:     137/170 (80.6%)
# Similarity:   157/170 (92.4%)
# Gaps:           0/170 ( 0.0%)
# Score: 664.0
# 
#
#=======================================

BSNT_05627___      1 MSQLPLELGLSFNGGDILFQLLAMLILLALLKKYALGPLLNIMKQREDHI     50
                     |||||:.||...|.|||:|||:|||||||||||:||.|||.|||||||:|
BPUM_3330___a      1 MSQLPVVLGAGLNTGDIIFQLIAMLILLALLKKFALKPLLGIMKQREDYI     50

BSNT_05627___     51 AGEITSAEEKNKEAQQLIEEQRVLLKEARQESQTLIENAKKLGEKQKEEI    100
                     ..||:|||:|:.:|::|:|||||||||||:||.||||||||:||||||||
BPUM_3330___a     51 GNEISSAEQKHVQAEKLLEEQRVLLKEAREESHTLIENAKKIGEKQKEEI    100

BSNT_05627___    101 IQAARAESERLKEAARTEIVKEKEQAVSALREQVASLSVMIASKVIEKEL    150
                     |||||.||||||::|||||||||||||:|||||||||||:|||||||:||
BPUM_3330___a    101 IQAARQESERLKDSARTEIVKEKEQAVAALREQVASLSVLIASKVIEREL    150

BSNT_05627___    151 DEQAQEKLIQDYLKEVGESR    170
                     ||||||||||:||||.||||
BPUM_3330___a    151 DEQAQEKLIQEYLKEAGESR    170


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