Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05626 and BPUM_3329
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence pep-align/BSNT_05626___atpH.1.24716.seq
# -bsequence pep-align/BPUM_3329___atpH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05626___atpH-BPUM_3329___atpH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05626___atpH-BPUM_3329___atpH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05626___atpH
# 2: BPUM_3329___atpH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 113/181 (62.4%)
# Similarity: 140/181 (77.3%)
# Gaps: 0/181 ( 0.0%)
# Score: 554.0
#
#
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BSNT_05626___ 1 MSGSAVSKRYASALFDIANESAQLNQVEEELTVVKQVFQNEKALNDVLNH 50
||.:.||||||||||||...|:.:::.|:||..:|:|.:.::.|||.|.|
BPUM_3329___a 1 MSVTIVSKRYASALFDIVLASSAVDETEKELNEIKKVLKADQELNDFLVH 50
BSNT_05626___ 51 PKMPAAKKKELIQNAFGSLSQSVLNTIFLLIDRHRAAIVLELTDEFIKLA 100
||:.|.|||.||..||..:|..||:|::|||||.|..|..|:|.||:|||
BPUM_3329___a 51 PKITADKKKHLIAEAFKGVSTHVLHTMYLLIDRGRTNIFSEMTSEFVKLA 100
BSNT_05626___ 101 NEARQTEDAIVYSVKPLTDAEMLPLSQVFAKKAGVASLRIRNEVQTDLIG 150
|..:|.:||||||||||:.||:..||:||||||||.|||:.|.:..||||
BPUM_3329___a 101 NRTKQIDDAIVYSVKPLSGAEIQSLSEVFAKKAGVTSLRVENVIDKDLIG 150
BSNT_05626___ 151 GIKVRIGNRIYDGSVSGKLQRIERQLAGENR 181
|:|:|||||||||||||||.|||||||||||
BPUM_3329___a 151 GVKIRIGNRIYDGSVSGKLSRIERQLAGENR 181
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