Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05623 and BPUM_3327

See DNA alignment / Visit BSNT_05623 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence pep-align/BSNT_05623___atpG.1.24716.seq
#    -bsequence pep-align/BPUM_3327___atpG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05623___atpG-BPUM_3327___atpG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05623___atpG-BPUM_3327___atpG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05623___atpG
# 2: BPUM_3327___atpG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     236/289 (81.7%)
# Similarity:   260/289 (90.0%)
# Gaps:           3/289 ( 1.0%)
# Score: 1164.5
# 
#
#=======================================

BSNT_05623___      1 MASLRDIKSRITSTKKTSQITKAMQMVSAAKLNRAENNAKSFVPYMDKIQ     50
                     ||||||||||||||||:|||||||||||||||||||||||||||||:|||
BPUM_3327___a      1 MASLRDIKSRITSTKKSSQITKAMQMVSAAKLNRAENNAKSFVPYMEKIQ     50

BSNT_05623___     51 EVVSNVGRVSGNVKHPMLLSREVKKTAYLVITSDRGLAGAFNSSVLRNAY    100
                     |||:.:. ...:.||||||||.||||.||||||||||||.||||:||.||
BPUM_3327___a     51 EVVAAIA-TGTSAKHPMLLSRPVKKTGYLVITSDRGLAGPFNSSILRAAY     99

BSNT_05623___    101 QAMQERHQSKDEYAVIAIGRVGRDFFKKREIPIISELTGLGDEVTFTEIK    150
                     |.:|.||||.||||||.||::||||||||.||:|||:|||||||.|.:||
BPUM_3327___a    100 QTIQSRHQSADEYAVIVIGKIGRDFFKKRGIPVISEVTGLGDEVAFADIK    149

BSNT_05623___    151 DLARQTIQMFIDGAFDELHLVYNHFVSAITQEVTEKKLLPLSDLGSGG--    198
                     :||..|:|||.|.|||||::.||||||||:|||||||||||:|:.:..  
BPUM_3327___a    150 ELASSTVQMFSDEAFDELYMFYNHFVSAISQEVTEKKLLPLTDISAAATP    199

BSNT_05623___    199 GKRTASYEFEPSEEEVLEVLLPQYAESLIFGALLDSKASEHAARMTAMKN    248
                     .||:|||||||||||:|||||||||||||||||||||||||||||||||:
BPUM_3327___a    200 NKRSASYEFEPSEEEILEVLLPQYAESLIFGALLDSKASEHAARMTAMKS    249

BSNT_05623___    249 ATDNAKELIDSLSLSYNRARQAAITQEITEIVGGAAALE    287
                     ||||||||||||:||||||||||||||||||||||||||
BPUM_3327___a    250 ATDNAKELIDSLTLSYNRARQAAITQEITEIVGGAAALE    288


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