Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05619 and BPUM_3324

See DNA alignment / Visit BSNT_05619 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_05619___ywmA.1.24716.seq
#    -bsequence pep-align/BPUM_3324___ywmA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05619___ywmA-BPUM_3324___ywmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05619___ywmA-BPUM_3324___ywmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05619___ywmA
# 2: BPUM_3324___ywmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:      82/168 (48.8%)
# Similarity:   114/168 (67.9%)
# Gaps:           0/168 ( 0.0%)
# Score: 456.0
# 
#
#=======================================

BSNT_05619___      1 MVYFIGKELANVNHSFFQPEKQYGEDLPIFDQEWEAIAFYYDYRQSQIEE     50
                     |:|.:.|||..:..||......|||.:|.||.||||||||:||||:|:||
BPUM_3324___y      1 MIYCVWKELNTLKDSFPDFVDLYGELVPSFDHEWEAIAFYFDYRQTQLEE     50

BSNT_05619___     51 LNELCQFFNISLTYTRESLEELENLYFQSIQELLLADWNLPIEEFEKMIS    100
                     |.:||.|.||||.|:.|||.:||:|||.:..:.|.|:|.:||:..|.|:|
BPUM_3324___y     51 LAQLCHFHNISLDYSEESLYQLESLYFDAFTKQLFAEWKMPIDALEAMLS    100

BSNT_05619___    101 VYLIDCVIARHEDAEWVVKPYPYKDGAYTLGFRRHRKSWHTMNACDGLYL    150
                     ||:.:.|:..|.||:|||:||......||||.|||.|:||:...|:.|||
BPUM_3324___y    101 VYMGEVVLRHHSDADWVVRPYMDSPHQYTLGLRRHNKTWHSTQFCEHLYL    150

BSNT_05619___    151 RQEEDRPLLSLFDSLVRS    168
                     .:::..|.:|::.||:..
BPUM_3324___y    151 EKQDSHPYVSMYQSLMSL    168


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