Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05618 and BPUM_3323

See DNA alignment / Visit BSNT_05618 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_05618___ywzB.1.24716.seq
#    -bsequence pep-align/BPUM_3323___ywzB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05618___ywzB-BPUM_3323___ywzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05618___ywzB-BPUM_3323___ywzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05618___ywzB
# 2: BPUM_3323___ywzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      55/76 (72.4%)
# Similarity:    69/76 (90.8%)
# Gaps:           0/76 ( 0.0%)
# Score: 307.0
# 
#
#=======================================

BSNT_05618___      1 MSVLGQQAAIGIVVHLIFIAVTWWALQAVNIDPLIKKGKVVQARLLMILL     50
                     |..:||||.:.||:||.|||:|||||.|:||||||||||:|||||||:|:
BPUM_3323___y      1 MEDVGQQAIVSIVIHLFFIAITWWALLAINIDPLIKKGKIVQARLLMMLI     50

BSNT_05618___     51 TIAIGTAVANFFLDYLNYSQQLPYLF     76
                     ||||.:||:||||||||:|:|:||:|
BPUM_3323___y     51 TIAIASAVSNFFLDYLNFSRQIPYMF     76


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