Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05618 and BPUM_3323
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_05618___ywzB.1.24716.seq
# -bsequence dna-align/BPUM_3323___ywzB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05618___ywzB-BPUM_3323___ywzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05618___ywzB-BPUM_3323___ywzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05618___ywzB
# 2: BPUM_3323___ywzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 166/239 (69.5%)
# Similarity: 166/239 (69.5%)
# Gaps: 16/239 ( 6.7%)
# Score: 508.5
#
#
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BSNT_05618___ 1 ATG--AG-TGTATTGGGACAGCAGGCTGCAATCG---GCATTGTCGTTCA 44
||| || .||| |||||.|| .||||||| |.|||||..|.||
BPUM_3323___y 1 ATGGAAGACGTA---GGACAACA---AGCAATCGTGAGTATTGTGATCCA 44
BSNT_05618___ 45 CCTGATTTTTATAGCAGTGACTTGGTGGGCGTTGCAAGCCGTCAATATAG 94
||||.|||||||.|||.|.||.||||||||.||||..||..|.|||||.|
BPUM_3323___y 45 CCTGTTTTTTATTGCAATTACATGGTGGGCATTGCTTGCTATAAATATTG 94
BSNT_05618___ 95 ATCCGTTAATCAAAAAAGGCAAAGTCGTGCAGGCTAGACTCCTGATGATT 144
|.||..|.||.||||||||.|||.||||.|||||.|||.|.||||||||.
BPUM_3323___y 95 ACCCACTGATTAAAAAAGGGAAAATCGTTCAGGCAAGATTGCTGATGATG 144
BSNT_05618___ 145 TTGCTGACAATTGCCATTGGAACGGCCGT-TGCTAATTTCTTTTTAGATT 193
.|..|.||.|||||.||||.|.|.||.|| .|| ||||||||..|.||||
BPUM_3323___y 145 CTCATTACCATTGCTATTGCATCTGCAGTCAGC-AATTTCTTCCTTGATT 193
BSNT_05618___ 194 ATCTCAATTATTCACAG-CAGCTTCCCTATCTATTTTAA 231
|..|.||||..|| ||| ||..|.||.|||.|.||.|||
BPUM_3323___y 194 ACTTAAATTTCTC-CAGACAAATACCTTATATGTTCTAA 231
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