Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00382 and BPUM_3316
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:16
# Commandline: needle
# -asequence pep-align/BSNT_00382.1.24716.seq
# -bsequence pep-align/BPUM_3316___ybfB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00382-BPUM_3316___ybfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00382-BPUM_3316___ybfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00382
# 2: BPUM_3316___ybfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity: 71/438 (16.2%)
# Similarity: 133/438 (30.4%)
# Gaps: 173/438 (39.5%)
# Score: 215.5
#
#
#=======================================
BSNT_00382 1 MKRLHYAWIIVSVTFLILLAVQGVRLSFGA------FVEPWERQFSIDRS 44
|.:....|:|.: :..|:.||.|: |..|..:.|....:
BPUM_3316___y 1 MNKSKNRWLIAT-------SAVGIHLSIGSVYAWSVFTNPLHQAFQWSLT 43
BSNT_00382 45 TISLISTVSFIVYGISQPVIGRLVDKWGARAVLAWSALLTGVSI----FL 90
.|||..:::.:..|:|...:|..|:::|.||...:||:..|:.: |.
BPUM_3316___y 44 EISLTFSIAILFLGLSAAFMGHFVERYGPRASGLFSAVFFGIGMTGSGFA 93
BSNT_00382 91 TYLVTSPWQLFLLYGL--GVSLGVGGASNVAASVLVVNWFSKKRGLAFGT 138
.::.:.| .|:|.||: |:.||| ..:|....:|.||..:||||.|.
BPUM_3316___y 94 VHMSSLP-LLYLFYGVLAGIGLGV---CYIAPVSTLVKWFPDRRGLATGL 139
BSNT_00382 139 MEAGFGAGQMLLVPGSLMLIHWFSWKLTVVVLGLLLILIVFPAALLMLRN 188
...|||...::..|....||.......|..:||:...:|:..::|.: :
BPUM_3316___y 140 AIMGFGFASLICSPIIQYLIEKVDIANTFYILGISYFMIMVISSLYL--S 187
BSNT_00382 189 NPSEKNTEPIGGLAASEKETAPKTTALSVAGMFRMRQF---WFLIFPFLI 235
.|:..:.:....|..::::.....:.|:.....:.|:| |.::|..:.
BPUM_3316___y 188 PPTPDDVKQFEVLKTNQRKIPQDLSQLTANEAIKTRRFYYLWLMLFINIT 237
BSNT_00382 236 CGFTTVGLMDTHLIPFSHDH-GFSTTVTSAAVSLLA-----GLILLASCC 279
||...:.:.. |.:.:. ||:....:..|.:|. |.|..||..
BPUM_3316___y 238 CGIAIISVAS----PLAQESVGFTAGAAATLVGILGAFNGLGRIGWASFS 283
BSNT_00382 280 PEL----------------------------------------------- 282
..:
BPUM_3316___y 284 DYIGRPNTYTIFFSIQLIAFPLLPYLKEPLVFSIVMAIIYTCYGGGFASI 333
BSNT_00382 282 -------------------------------------------------- 282
BPUM_3316___y 334 PAYIGDLFGTKQLGAIHGYILTAWAAAGLAGPLFSSFIRDITGNYTQSLM 383
BSNT_00382 282 -------------------------------------- 282
BPUM_3316___y 384 VFSGLFFIAFIISLLIRKDIQQLRETNLTTTSSVSSRP 421
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