Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05604 and BPUM_3315

See DNA alignment / Visit BSNT_05604 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_05604___fdhD.1.24716.seq
#    -bsequence pep-align/BPUM_3315___fdhD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05604___fdhD-BPUM_3315___fdhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05604___fdhD-BPUM_3315___fdhD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05604___fdhD
# 2: BPUM_3315___fdhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     182/262 (69.5%)
# Similarity:   215/262 (82.1%)
# Gaps:           0/262 ( 0.0%)
# Score: 963.0
# 
#
#=======================================

BSNT_05604___      1 MNDKVTAVRDVWRYEQGEISKVEDRMVTEFPLTVILNGSEFVTLVCTPEH     50
                     ||..|...|.:.:|.:|:.:...|.:|.|||||||:||.|||||||:|:|
BPUM_3315___f      1 MNPSVKKKRVIHQYREGQFTCKTDEVVEEFPLTVIVNGEEFVTLVCSPDH     50

BSNT_05604___     51 IEELVIGFLASEGVIRFQKEIKRFTIDESLGFVYVDLVHPETLDQKDYTK    100
                     ::|||||||||||||||:.||||||||||:||.||||||.......|:||
BPUM_3315___f     51 LKELVIGFLASEGVIRFENEIKRFTIDESMGFAYVDLVHSSEFQSSDFTK    100

BSNT_05604___    101 RVIGSCCGKGRHFYFQQDVKTAKTAVSQIKISPEACLALMKDMQQGSGTF    150
                     |||||||||||||||.|||||||||:.:|.||.:.|:.|||.:|:.|..|
BPUM_3315___f    101 RVIGSCCGKGRHFYFLQDVKTAKTAIDRINISADTCMRLMKSLQEESQLF    150

BSNT_05604___    151 QDTGGVHNAALCDTEKLLLMRTDIGRHNALDKLYGHCLLNGMSVRDKLIV    200
                     |.|||||||.|||||||.:.||||||||||||:||:|||:.:.:|||::|
BPUM_3315___f    151 QHTGGVHNAGLCDTEKLFITRTDIGRHNALDKIYGYCLLHQIPLRDKILV    200

BSNT_05604___    201 FSGRISSEVLLKAAKIGVSIVISKSAPTELAIQMAEELNITAIGFVRNGS    250
                     |||||||||||||||:|||||||||||||||:.||||||||.:||||..|
BPUM_3315___f    201 FSGRISSEVLLKAAKLGVSIVISKSAPTELALNMAEELNITTVGFVRGES    250

BSNT_05604___    251 FNVYTHPERIRG    262
                     ||:|||.:||..
BPUM_3315___f    251 FNIYTHHQRITE    262


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