Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00594 and BPUM_3311
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:23
# Commandline: needle
# -asequence pep-align/BSNT_00594.1.24716.seq
# -bsequence pep-align/BPUM_3311___yciC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00594-BPUM_3311___yciC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00594-BPUM_3311___yciC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00594
# 2: BPUM_3311___yciC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 173/398 (43.5%)
# Similarity: 196/398 (49.2%)
# Gaps: 171/398 (43.0%)
# Score: 886.0
#
#
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BSNT_00594 1 -MKKIPVTVLSGYLGAGKTTLLNSILQNREGLKIAVIVNDMSEVNIDAGL 49
.|:||||||||:|||||||:||.:||||:|||:|||||||||:||||.|
BPUM_3311___y 1 MNKRIPVTVLSGFLGAGKTTILNHVLQNRKGLKVAVIVNDMSEINIDAEL 50
BSNT_00594 50 VKQEGGLSRTDEKLVEMSNGCICCTLREDLLIEVEKLAKDGRFDYIVIES 99
|||.|.|||:||||||:||||||||||||||||||:|.|.|..|||||||
BPUM_3311___y 51 VKQGGELSRSDEKLVELSNGCICCTLREDLLIEVERLCKTGHIDYIVIES 100
BSNT_00594 100 TGISEPIPVAQTFSYIDEEMGIDLTKFCQLDTMVTVVDANRFWHDYQSGE 149
|||||||||||||||||||||||||:||:||||||||||||||.|:||||
BPUM_3311___y 101 TGISEPIPVAQTFSYIDEEMGIDLTRFCRLDTMVTVVDANRFWTDFQSGE 150
BSNT_00594 150 SLLDRKEALGEEDEREIADLLIDQIEFCDVLILNKCDLVSEQELEQLENV 199
||||||:|:.|:|||||:||||||||||||||:|||||||..||::||:|
BPUM_3311___y 151 SLLDRKQAVSEDDEREISDLLIDQIEFCDVLIINKCDLVSNSELDRLEHV 200
BSNT_00594 200 LRKLQPRAKFIRCQRKCKTAGDFAYRVI---------------------- 227
|..|||.|..||..:......|.....:
BPUM_3311___y 201 LTTLQPEASIIRTSKGQVKPSDILNTGLFDFEKSSASAGWIKEINAGHSQ 250
BSNT_00594 227 -------------------------------------------------- 227
BPUM_3311___y 251 HTPETEEYNISSFVYERRLPFHTSRLNHWLDQMPEQIVRAKGFTWLATHH 300
BSNT_00594 227 -------------------------------------------------- 227
BPUM_3311___y 301 DLTILISQAGKSVQIEPIAYWIAALPEQEKAQILKQEPELLDEWDAEFGD 350
BSNT_00594 227 ------------------------------------------------ 227
BPUM_3311___y 351 RHTKLVFIGVDLPKADIIRTLDQCLLTHEEFDQDWTTFEDPFQWKIQH 398
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