Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05575 and BPUM_3301

See DNA alignment / Visit BSNT_05575 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:11
# Commandline: needle
#    -asequence pep-align/BSNT_05575___nrgB.1.24716.seq
#    -bsequence pep-align/BPUM_3301___nrgB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05575___nrgB-BPUM_3301___nrgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05575___nrgB-BPUM_3301___nrgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05575___nrgB
# 2: BPUM_3301___nrgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:      95/116 (81.9%)
# Similarity:   105/116 (90.5%)
# Gaps:           1/116 ( 0.9%)
# Score: 495.0
# 
#
#=======================================

BSNT_05575___      1 MSGQMFKVEIVTRPANFEKLKQELGKIGVTSLTFSNVHGCGLQKAHTELY     50
                      ..:|:||||||||||||.||.|||||||||:||||||||||||.|||||
BPUM_3301___n      1 -MSKMYKVEIVTRPANFETLKVELGKIGVTSITFSNVHGCGLQKGHTELY     49

BSNT_05575___     51 RGVKIESNVYERLKIEIVVSKVPVDQVTETAKRVLKTGSPGDGKIFVYEI    100
                     ||||.|||||||||||||:|:|||:||.|||::||:||.|||||||:|||
BPUM_3301___n     50 RGVKKESNVYERLKIEIVLSEVPVEQVVETAQKVLRTGEPGDGKIFIYEI     99

BSNT_05575___    101 SNTINIRTGEEGPEAL    116
                     .||||||||||||.||
BPUM_3301___n    100 ENTINIRTGEEGPAAL    115


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