Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05564 and BPUM_3293
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence pep-align/BSNT_05564___ywoG.1.24716.seq
# -bsequence pep-align/BPUM_3293___ywoG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05564___ywoG-BPUM_3293___ywoG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05564___ywoG-BPUM_3293___ywoG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05564___ywoG
# 2: BPUM_3293___ywoG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 243/397 (61.2%)
# Similarity: 310/397 (78.1%)
# Gaps: 3/397 ( 0.8%)
# Score: 1281.0
#
#
#=======================================
BSNT_05564___ 1 MKKADAIWTKDFIMVLLVNLFVFVFFYTFLTVLPIYTLQELGGTESQGGL 50
..:.|||:||||::|||||.|..||..||:|||||:.||.||||||||
BPUM_3293___y 1 --MNERIWTRDFIMIVLVNLFTFTSFYALLTLLPIYTMDELNGTESQGGL 48
BSNT_05564___ 51 LISLFLLSAIITRPFSGAIVERFGKKRMAIVSMALFALSSFLYMPIHNFS 100
|:::||||||:||||||||:|:||||||||.|...|||.::||:||..|.
BPUM_3293___y 49 LVTVFLLSAIVTRPFSGAIIEKFGKKRMAIFSSTAFALLTYLYIPIDQFQ 98
BSNT_05564___ 101 LLLGLRFFQGIWFSILTTVTGAIAADIIPAKRRGEGLGYFAMSMNLAMAI 150
.||.|||.|||:||||||||.|||||:||..:||||||||.||||||:.|
BPUM_3293___y 99 TLLMLRFVQGIFFSILTTVTSAIAADMIPKHKRGEGLGYFVMSMNLAVVI 148
BSNT_05564___ 151 GPFLGLNLMRVVSFPVFFTAFALFMVAGLLVSFLIKVPQSKDSGTTVFRF 200
|||:.||.:..|.|...|..|::.:..|...:.||:.|:.:|.|:.||||
BPUM_3293___y 149 GPFIALNQVGKVGFHSLFLLFSIIVTIGAAFTMLIRQPELEDGGSVVFRF 198
BSNT_05564___ 201 AFSDMFEKGALKIATVGLFISFCYSTVTSYLSVFAKSVDLSDISGYFFVC 250
.||.:|||||||.|.||:.||||||.:.|::||:|.|:||...|.:||:.
BPUM_3293___y 199 TFSHLFEKGALKTAAVGIIISFCYSPIISFISVYANSLDLMGASSFFFIV 248
BSNT_05564___ 251 FAVTMMIARPFTGKLFDKVGPGIVIYPSILIFSVGLCMLSFTHSGLMLLL 300
||..|:.:|||||:|||:|||.|||||||.:|::||.||:.|||..||||
BPUM_3293___y 249 FAAAMLGSRPFTGRLFDRVGPHIVIYPSIALFAIGLWMLTATHSATMLLL 298
BSNT_05564___ 301 SGAVIGLGYGSIVPCMQTLAIQKSPAHRSGFATATFFTFFDSGIAVGSYV 350
||.||||||||:|||:||||||.|||||:|:|||||||.:|:|||.||:|
BPUM_3293___y 299 SGGVIGLGYGSLVPCLQTLAIQHSPAHRTGYATATFFTLYDTGIAAGSFV 348
BSNT_05564___ 351 FGLFVASAGFSAIYLTAGLFVLIALLLYTWSQKKTAEAEG-KVSIAE 396
|||.|:...||.:||.||:.||::::::.||::|..||:. |||::|
BPUM_3293___y 349 FGLLVSFTDFSNVYLIAGIVVLLSMIVFYWSERKPQEAKAQKVSLSE 395
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