Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05564 and BPUM_3293
See
Amino acid alignment /
Visit
BSNT_05564 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence dna-align/BSNT_05564___ywoG.1.24716.seq
# -bsequence dna-align/BPUM_3293___ywoG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05564___ywoG-BPUM_3293___ywoG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05564___ywoG-BPUM_3293___ywoG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05564___ywoG
# 2: BPUM_3293___ywoG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1272
# Identity: 804/1272 (63.2%)
# Similarity: 804/1272 (63.2%)
# Gaps: 165/1272 (13.0%)
# Score: 2184.0
#
#
#=======================================
BSNT_05564___ 1 TTGAAAAAAGCGGATGCGATATGGACCAAGGATTTTATTATGGTCCTGCT 50
.|||| ||.|.|| ||.|||||.|..||.|||||.|||.|..|.||
BPUM_3293___y 1 ATGAA-----CGAACGC-ATTTGGACGAGAGACTTTATCATGATTGTTCT 44
BSNT_05564___ 51 TGTCAATTTATTTGTGTT----TGTGTTCTTTTATACATTTTTAACTGTA 96
.||.|||||||||..||| |.| ||||||.|..||||.||..|.
BPUM_3293___y 45 GGTGAATTTATTTACGTTCACCTCT----TTTTATGCCCTTTTGACCTTG 90
BSNT_05564___ 97 TTGCCGATCTACACGCTGCAAGAGCTTGGCGGTACAGAATCACAAGGCGG 146
.||||.||.|||||..||.|.||.||....||.|||||||||||.||.||
BPUM_3293___y 91 CTGCCTATTTACACAATGGATGAACTCAATGGAACAGAATCACAGGGTGG 140
BSNT_05564___ 147 GCTTTTAAT--CAGCCTGTTCCTTCTGTCTGCGATCATTACACGGCCTTT 194
.|||.|..| ||| |.|||.|..||||.||.||..|.|||.|.||.||
BPUM_3293___y 141 CCTTCTTGTGACAG--TCTTCTTATTGTCCGCCATTGTGACAAGACCGTT 188
BSNT_05564___ 195 CTCCGGAGCCATCGTTGAGCGTTTCGGGAAGAAAAGAATGGCGATTGT-- 242
.||.|||||.||..|||||...|||||.||.|||.|.|||||||||.|
BPUM_3293___y 189 TTCTGGAGCGATTATTGAGAAATTCGGTAAAAAACGGATGGCGATTTTCT 238
BSNT_05564___ 243 -ATCAATGGCGCTCTTCGCCCTA-TCATCTTTTCTGTATATGCCGATTCA 290
|||||.||| .||.|||.|| ||| |||.|.|.||.||.||.|||.|
BPUM_3293___y 239 CATCAACGGC---ATTTGCCTTACTCA-CTTATTTATACATCCCAATTGA 284
BSNT_05564___ 291 T--------AACTTTTC-CCTGCTGCTCGGATTGCGGTTCTTCCAAGGGA 331
| |||..||| |.||| ||||.|||.|.||.||.|
BPUM_3293___y 285 TCAATTCCAAACACTTCTCATGC---------TGCGTTTCGTGCAGGGCA 325
BSNT_05564___ 332 TTTGGTTCAGCATTTTAACGACTGTTACAGGTGCAATTGCCGCTGATATT 381
|.|..||.||||||||.|||||.||.||..||||.||.||.||.|||||.
BPUM_3293___y 326 TCTTTTTTAGCATTTTGACGACAGTAACCAGTGCCATAGCAGCAGATATG 375
BSNT_05564___ 382 ATTCCAGCCAAAC---GGCGCGGTGAAGGGCTTGGATACTTTGCCATGTC 428
|||||| |||| ..|||||.|||||.||.||.|||||||.||||||
BPUM_3293___y 376 ATTCCA---AAACATAAACGCGGGGAAGGACTCGGCTACTTTGTCATGTC 422
BSNT_05564___ 429 TATGAACCTCGCTATGGCGATTGGGCCTTTCCTTGGCCTGAAT----TTG 474
.||||||||.|||.|||..||.||.||.||..|||...||||| |.|
BPUM_3293___y 423 CATGAACCTTGCTGTGGTTATCGGTCCATTTATTGCATTGAATCAAGTAG 472
BSNT_05564___ 475 ATGAGAGTGGTAAG----CTTTCCTGTATTCTTTACAGCCTTTGCGCTGT 520
||...|||.| |.||||| |||||.|| ||||.|.| ..
BPUM_3293___y 473 ----GAAAAGTAGGATTCCATTCCT-TATTCCTT-----CTTTTCTC-CA 511
BSNT_05564___ 521 TTATGGTTGC----GG----GCTTACTTGTTTCGTTCTTGATAAAAGTGC 562
||||.|||.| || |||| ||.||.|..|.||.|.|..||
BPUM_3293___y 512 TTATCGTTACCATTGGTGCCGCTT-----TTACGATGCTAATCAGACAGC 556
BSNT_05564___ 563 C---GC---AAAGTAAGGACAGCGGCACGACTGTATTCCGTTTTGCGTTC 606
| || ||..|..||..||.|.| ||.|||||.|||.|.||.
BPUM_3293___y 557 CAGAGCTTGAAGATGGGGGTAGTGTC------GTCTTCCGATTTACTTTT 600
BSNT_05564___ 607 TCGGATATGTTTGAAAAGGGCGCACTCAAAATTGCGACGGTCGGTTTGTT 656
||..|..||||||||||.||.|||.|.||||..||..|.||||||.|..|
BPUM_3293___y 601 TCTCACTTGTTTGAAAAAGGTGCATTAAAAACAGCAGCAGTCGGTATCAT 650
BSNT_05564___ 657 TATTTCTTTCTGTTATTCAACAGTCACATCATATCTGTCTGTATTCGCCA 706
||||||.|||||||||||..|..|||..||||.|.|.||.||.|..||||
BPUM_3293___y 651 TATTTCCTTCTGTTATTCGCCGATCATTTCATTTATTTCAGTCTATGCCA 700
BSNT_05564___ 707 AATCAGTTGACCTTTCGGAT------ATCAGCGGATATTTCTTTGTTTGT 750
|.||..|||||.| ||| | |||.|.|.||||||| .||||
BPUM_3293___y 701 ATTCCCTTGACTT----GATGGGGGCA--AGCAGTTTTTTCTTT-ATTGT 743
BSNT_05564___ 751 -TTTGCGGTGACAATGAT--GATTGCACGCCCGTTCACAGGGAAATTGTT 797
|||||||...|||||.| ||| ||||.||.||.|||||.|.|.|.||
BPUM_3293___y 744 GTTTGCGGCAGCAATGCTTGGAT--CACGTCCATTTACAGGCAGACTTTT 791
BSNT_05564___ 798 CGACAAAGTCGGACCGGGCATTGTCATTTATCCATCAATCCTGATTTTCT 847
.|||..|||.|||||...||||||.||.|||||.||.|| ||.|.|| |
BPUM_3293___y 792 TGACCGAGTAGGACCTCACATTGTGATCTATCCTTCGAT--TGCTCTT-T 838
BSNT_05564___ 848 CTG---TCGGACTCTGCATGCTGTC--CTTCACACAT--AGCGGCTTAAT 890
.|| |.||..|.||.||||||.| || |||||| |||..| |||
BPUM_3293___y 839 TTGCGATTGGTTTATGGATGCTGACGGCT--ACACATTCAGCTAC--AAT 884
BSNT_05564___ 891 GCTTCTGCTTTCAGGGGCGGTTATCGGTCTTGGCTACGGATCAATCGTTC 940
||||||..|.|||||.|..||.||.||.||||||||.||||||.|.||.|
BPUM_3293___y 885 GCTTCTTTTATCAGGTGGTGTCATTGGACTTGGCTATGGATCACTAGTAC 934
BSNT_05564___ 941 CTTGCATGCAAACATTGGCGATTCAGAAATCTCCGGCTCACCGCTCCGGT 990
|.||..|.||||||.|.||.||||||.|.||.||.||||||||..|.||.
BPUM_3293___y 935 CATGTTTACAAACACTTGCCATTCAGCATTCGCCAGCTCACCGTACAGGC 984
BSNT_05564___ 991 TTTGCAACGGCAACGTTCTTTACCTTCTTTGACAGCGGAATTGCTGTAGG 1040
|.|||.|||||.||.|||||.||.||.|.|||.|..||.|||||||..||
BPUM_3293___y 985 TATGCGACGGCTACTTTCTTCACTTTATATGATACGGGGATTGCTGCTGG 1034
BSNT_05564___ 1041 ATCGTATGTATTCGGATTGTTTGT-AGCATCTGCCGGCTTCTC---TGCC 1086
.||.|.||||||.||..|..|||| |||.|| .|||..||.|| ||
BPUM_3293___y 1035 CTCATTTGTATTTGGTCTTCTTGTCAGCTTC-ACCGATTTTTCAAATG-- 1081
BSNT_05564___ 1087 ATTTATTTAACAGCGGGGCTGTTCGTTTTAATTGCTC--------TGCTT 1128
|.|||.|.|..||.|| |.|| |||.| .|||||| || ||
BPUM_3293___y 1082 -TATATCTCATTGCAGG--TATT-GTTGT-CTTGCTCAGTATGATTG-TT 1125
BSNT_05564___ 1129 CTCTATACGTGGAGCCAGAAAAAAACTGC----AGAGGCTGAAGGA---A 1171
.|.||| |||||| |||..||| || |||.||..|||.| |
BPUM_3293___y 1126 TTTTAT---TGGAGC--GAACGAAA--GCCCCAAGAAGCAAAAGCACAGA 1168
BSNT_05564___ 1172 AAGTGT--CTATTGCAGAATAA 1191
|.||.| |||| |||||||.
BPUM_3293___y 1169 AGGTCTCCCTAT--CAGAATAG 1188
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.