Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05560 and BPUM_3290

See DNA alignment / Visit BSNT_05560 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_05560___mbl.1.24716.seq
#    -bsequence pep-align/BPUM_3290___mbl.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05560___mbl-BPUM_3290___mbl.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05560___mbl-BPUM_3290___mbl.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05560___mbl
# 2: BPUM_3290___mbl
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     320/333 (96.1%)
# Similarity:   329/333 (98.8%)
# Gaps:           0/333 ( 0.0%)
# Score: 1608.0
# 
#
#=======================================

BSNT_05560___      1 MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVALDKNSGKVLAVGEEARR     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_3290___m      1 MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVALDKNSGKVLAVGEEARR     50

BSNT_05560___     51 MVGRTPGNIVAIRPLKDGVIADFEVTEAMLKHFINKLNVKGLFSKPRMLI    100
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BPUM_3290___m     51 MVGRTPGNIVAIRPLKDGVIADFEVTEAMLKHFINSLNVKGLFSKPRMLI    100

BSNT_05560___    101 CCPTNITSVEQKAIKEAAEKSGGKHVYLEEEPKVAAIGAGMEIFQPSGNM    150
                     ||||||||||||||||||||||||||:||||||||||||||:||||||||
BPUM_3290___m    101 CCPTNITSVEQKAIKEAAEKSGGKHVFLEEEPKVAAIGAGMDIFQPSGNM    150

BSNT_05560___    151 VVDIGGGTTDIAVISMGDIVTSSSIKMAGDKFDMEILNYIKREYKLLIGE    200
                     |||||||||||||||||||||:|||||||||||:|||||||:||||||||
BPUM_3290___m    151 VVDIGGGTTDIAVISMGDIVTASSIKMAGDKFDLEILNYIKKEYKLLIGE    200

BSNT_05560___    201 RTAEDIKIKVATVFPDARHEEISIRGRDMVSGLPRTITVNSKEVEEALRE    250
                     ||||||||:|||||||||||||||||||||:||||||||.||||||||||
BPUM_3290___m    201 RTAEDIKIQVATVFPDARHEEISIRGRDMVTGLPRTITVTSKEVEEALRE    250

BSNT_05560___    251 SVAVIVQAAKQVLERTPPELSADIIDRGVIITGGGALLNGLDQLLAEELK    300
                     ||:.||||||||||||||||||||||||||||||||||||||||||||||
BPUM_3290___m    251 SVSAIVQAAKQVLERTPPELSADIIDRGVIITGGGALLNGLDQLLAEELK    300

BSNT_05560___    301 VPVLVAENPMDCVAIGTGVMLDNMDKLPKRKLS    333
                     |||.||||||||||:||||||||||||||||||
BPUM_3290___m    301 VPVFVAENPMDCVAVGTGVMLDNMDKLPKRKLS    333


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